ggKbase home page

qs_9_scaffold_3356

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_3356_1
unknown

Not on your lists

1..75
DNA (75bp) protein (25aa)

This feature has no annotations

qs_9_scaffold_3356_2
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(86..739)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SNG7_9EURY
Halocyanin domain protein {ECO:0000313|EMBL:ELZ45538.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284
halocyanin domain protein
qs_9_scaffold_3356_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

836..1426
DNA (591bp) protein (197aa)
Lrp/AsnC family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR21_NATPD
transcription regulator
Lrp/AsnC family transcription regulator {ECO:0000313|EMBL:CAI49423.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
qs_9_scaffold_3356_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1637..4171
DNA (2535bp) protein (845aa)
P-type transport ATPase (Probable substrate copper/metal cation) {ECO:0000313|EMBL:CAI49425.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAI49425.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; H
tpa01; transport ATPase 1 ( substrates copper/metal cation) (EC:3.6.3.-)
P-type transport ATPase (Probable substrate copper/metal cation) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR19_NATPD
qs_9_scaffold_3356_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5257..5694)
DNA (438bp) protein (146aa)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:CAI49431.1}; EC=1.8.1.9 {ECO:0000313|EMBL:CAI49431.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Thioredoxin-disulfide reductase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR13_NATPD
trxB_1; thioredoxin reductase
qs_9_scaffold_3356_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5691..6071)
DNA (381bp) protein (127aa)
trxB1; thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:CCQ37244.1}; EC=1.8.1.9 {ECO:0000313|EMBL:CCQ37244.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Thioredoxin-disulfide reductase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL81_NATM8
qs_9_scaffold_3356_7

Not on your lists

comp(6977..7552)
DNA (576bp) protein (192aa)
Uncharacterized protein n=3 Tax=Archaea RepID=B9LVU4_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07413.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_9_scaffold_3356_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8220..9578
DNA (1359bp) protein (453aa)
pmm_3; phosphohexomutase 3 (phosphoglucomutase, phosphomannomutase ) (EC:5.4.2.8 5.4.2.2)
Phosphohexomutase (Phosphoglucomutase / phosphomannomutase) {ECO:0000313|EMBL:CAI49848.1}; EC=5.4.2.- {ECO:0000313|EMBL:CAI49848.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
Phosphohexomutase (Phosphoglucomutase / phosphomannomutase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPV0_NATPD
qs_9_scaffold_3356_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9610..10002
DNA (393bp) protein (131aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:CAI49847.1}; EC=3.5.4.5 {ECO:0000313|EMBL:CAI49847.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
Cytidine deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPV1_NATPD
qs_9_scaffold_3356_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9999..10628
DNA (630bp) protein (210aa)
udp1; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase {ECO:0000313|EMBL:CCQ36640.1}; EC=2.4.2.3 {ECO:0000313|EMBL:CCQ36640.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Uridine phosphorylase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKW7_NATM8
qs_9_scaffold_3356_11
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10755..11612
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E5X1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42448.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
qs_9_scaffold_3356_12
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11652..13325)
DNA (1674bp) protein (558aa)
alkK_4; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3 6.2.1.-)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XBR5_9EURY
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ELY59062.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius
qs_9_scaffold_3356_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13859..16303)
DNA (2445bp) protein (815aa)
dld_2; D-lactate dehydrogenase / iron-sulfur protein ( glycolate oxidase iron-sulfur subunit) (EC:1.1.1.28)
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR8_NATPD
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein) {ECO:0000313|EMBL:CAI48817.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
qs_9_scaffold_3356_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16300..16839)
DNA (540bp) protein (180aa)
dld_2; D-lactate dehydrogenase / iron-sulfur protein ( glycolate oxidase iron-sulfur subunit) (EC:1.1.1.28)
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR8_NATPD
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein) {ECO:0000313|EMBL:CAI48817.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
qs_9_scaffold_3356_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16907..17398)
DNA (492bp) protein (164aa)
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000313|EMBL:CAI49552.1}; EC=1.5.1.3 {ECO:0000313|EMBL:CAI49552.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Dihydrofolate reductase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQP3_NATPD
qs_9_scaffold_3356_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17395..17490)
DNA (96bp) protein (32aa)
Thymidylate synthase {ECO:0000313|EMBL:CAI49553.1}; EC=2.1.1.45 {ECO:0000313|EMBL:CAI49553.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Displaying 16 items

View Taxonomy