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qs_9_scaffold_3693

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_3693_1
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3..1058
DNA (1056bp) protein (352aa)
Major facilitator superfamily protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9VZB2_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:ELY42539.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum su
major facilitator superfamily transporter
qs_9_scaffold_3693_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1115..2047
DNA (933bp) protein (311aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000255|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00304}; Shor
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RUBPS_NATPD
thi1; ribulose-1,5-biphosphate synthetase
qs_9_scaffold_3693_3
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2361..2750)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CPX8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24442.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qs_9_scaffold_3693_4
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3089..3481)
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
PilT protein domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D5A6_HALXS
twitching motility protein PilT
qs_9_scaffold_3693_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3478..3729)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D5A7_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH37606.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qs_9_scaffold_3693_6
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4735..6015
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPE9_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11736.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qs_9_scaffold_3693_7
unknown

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comp(5975..6370)
DNA (396bp) protein (132aa)

This feature has no annotations

qs_9_scaffold_3693_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6401..7057)
DNA (657bp) protein (219aa)
S-adenosylmethionine-dependent methyltransferase 3 (EC:2.1.1.-)
Probable S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:CAI50676.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAI50676.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
Probable S-adenosylmethionine-dependent methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMI2_NATPD
qs_9_scaffold_3693_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7057..7953)
DNA (897bp) protein (299aa)
HTH domain protein / thiamine-phosphate synthase {ECO:0000313|EMBL:CAI50675.1}; EC=2.5.1.3 {ECO:0000313|EMBL:CAI50675.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
HTH domain protein / thiamine-phosphate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMI3_NATPD
hypothetical protein
qs_9_scaffold_3693_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7950..8543)
DNA (594bp) protein (198aa)
dcd; dCTP deaminase (dUMP-forming) (EC:3.5.4.30)
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=268739 s
Probable deoxycytidine triphosphate deaminase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU49_NATM8
qs_9_scaffold_3693_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8582..8884
DNA (303bp) protein (101aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:CAI50703.2}; EC=3.1.1.29 {ECO:0000313|EMBL:CAI50703.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Peptidyl-tRNA hydrolase n=2 Tax=Natronomonas pharaonis RepID=Q3IMF5_NATPD
qs_9_scaffold_3693_12
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8922..9203
DNA (282bp) protein (94aa)
hypothetical protein id=24620358 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ERH02979.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
qs_9_scaffold_3693_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9279..10007
DNA (729bp) protein (243aa)
truD; tRNA pseudouridine(13) synthase TruD (EC:5.4.99.27)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPT8_NATM8
qs_9_scaffold_3693_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10018..10500
DNA (483bp) protein (161aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D {ECO:0000255|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000255|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000255|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRUD_NATPD
qs_9_scaffold_3693_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10721..11389
DNA (669bp) protein (223aa)
Type 11 methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D5U2_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELZ29499.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
type 11 methyltransferase
qs_9_scaffold_3693_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11394..11873
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK8_NATM8
hypothetical protein
DUF2103 family protein {ECO:0000313|EMBL:CCQ36078.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
qs_9_scaffold_3693_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11822..11995
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK8_NATM8
hypothetical protein
DUF2103 family protein {ECO:0000313|EMBL:CCQ36078.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
qs_9_scaffold_3693_18
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11992..12336)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LH99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA31809.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
Displaying 18 items

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