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qs_9_scaffold_1316

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1316_1
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..228)
DNA (228bp) protein (76aa)
Hydrogenase expression/formation protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JZW9_9EURY
hypE; hydrogenase expression/formation protein
Hydrogenase expression/formation protein {ECO:0000313|EMBL:EMA13459.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
qs_9_scaffold_1316_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

538..1179
DNA (642bp) protein (214aa)
DNA mismatch repair protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAN4_9EURY
DNA mismatch repair protein {ECO:0000313|EMBL:EMA54628.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
DNA mismatch repair protein MutS
qs_9_scaffold_1316_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1127..2413
DNA (1287bp) protein (429aa)
DNA mismatch repair protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAN4_9EURY
DNA mismatch repair protein {ECO:0000313|EMBL:EMA54628.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
DNA mismatch repair protein MutS
qs_9_scaffold_1316_4
unknown

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comp(2495..2707)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_9_scaffold_1316_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3059..3226
DNA (168bp) protein (56aa)
Type i restriction-modification system methyltransferase subunit id=24647432 bin=uncultivated_archaeon_J07ABHX6 species=Haloarcula sinaiiensis genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08579.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_9_scaffold_1316_6
unknown

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comp(3801..4100)
DNA (300bp) protein (100aa)

This feature has no annotations

qs_9_scaffold_1316_7
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4261..4713)
DNA (453bp) protein (151aa)
Putative metal-binding protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AI77_NATGS
metal-binding protein
Putative metal-binding protein {ECO:0000313|EMBL:AFZ73516.1}; Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:ELY68372.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natr
qs_9_scaffold_1316_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4745..5920
DNA (1176bp) protein (392aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC88_9EURY
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase / tRNA (guanine-N2-)-methyltransferase
qs_9_scaffold_1316_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5964..6902
DNA (939bp) protein (313aa)
Ribonuclease BN n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUP7_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA35820.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ribonuclease BN
qs_9_scaffold_1316_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7142..7984
DNA (843bp) protein (281aa)
Ribonuclease BN n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQQ6_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA35821.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hypothetical protein
qs_9_scaffold_1316_11
unknown

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comp(8103..8339)
DNA (237bp) protein (79aa)

This feature has no annotations

qs_9_scaffold_1316_12
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9456..9656
DNA (201bp) protein (67aa)
Ribonuclease BN n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XI85_9EURY
Ribonuclease BN {ECO:0000313|EMBL:ELY61322.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.;
hypothetical protein
qs_9_scaffold_1316_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10071..12533
DNA (2463bp) protein (821aa)
Sec-independent protein translocase component TatC 1 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4M2_9EURY
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
Sec-independent periplasmic protein translocase
qs_9_scaffold_1316_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12738..13307)
DNA (570bp) protein (190aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCP2_9EURY
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA55338.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
membrane-bound metal-dependent hydrolase
qs_9_scaffold_1316_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13329..14384)
DNA (1056bp) protein (352aa)
hypothetical protein id=24615246 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
CHRD domain containing protein {ECO:0000313|EMBL:ESP88410.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
parallel beta-helix repeat (two copies)
qs_9_scaffold_1316_16
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14658..17252
DNA (2595bp) protein (865aa)
40-residue YVTN family beta-propeller repeat-containing protein n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AXR9_9BACI
40-residue YVTN family beta-propeller repeat-containing protein rbh
40-residue YVTN family beta-propeller repeat-containing protein {ECO:0000313|EMBL:AGK53246.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillu
qs_9_scaffold_1316_17
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17515..18063
DNA (549bp) protein (183aa)
Phosphoesterase PA-phosphatase-related protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YBV1_9EURY
Phosphoesterase PA-phosphatase-related protein {ECO:0000313|EMBL:ELY71520.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema v
phosphoesterase PA-phosphatase-related protein
qs_9_scaffold_1316_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18323..19696)
DNA (1374bp) protein (458aa)
glnA_1; glutamate--ammonia ligase 1 (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Glutamine synthetase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUQ1_NATPD
qs_9_scaffold_1316_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19822..20280
DNA (459bp) protein (153aa)
Transcription regulator AsnC-type-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC83_9EURY
Transcription regulator AsnC-type-like protein {ECO:0000313|EMBL:EMA55183.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
ArsR family transcriptional regulator
qs_9_scaffold_1316_20
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20426..21676
DNA (1251bp) protein (417aa)
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AMK9_NATGS
cystathionine beta-lyase/cystathionine gamma-synthase
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:AFZ74689.1}; Cystathionine synthase/lyase {ECO:0000313|EMBL:ELY73406.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacte
qs_9_scaffold_1316_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21733..23691
DNA (1959bp) protein (653aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=931277 species="Archaea; Eury
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M507_HALMO
qs_9_scaffold_1316_22
unknown

Not on your lists

23889..24365
DNA (477bp) protein (159aa)

This feature has no annotations

qs_9_scaffold_1316_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24362..24511)
DNA (150bp) protein (50aa)
50S ribosomal protein L40e n=2 Tax=Halococcus RepID=M0MF84_HALMO
50S ribosomal protein L40e {ECO:0000256|HAMAP-Rule:MF_00788}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
rpl40e; 50S ribosomal protein L40e
qs_9_scaffold_1316_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24571..25203)
DNA (633bp) protein (211aa)
Probable ribosome biogenesis protein C448_08904 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIV7_HALMO
Probable ribosome biogenesis protein C448_08904 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
conserved hypothetical protein (DUF367)
qs_9_scaffold_1316_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25339..25665
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M494_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40627.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_9_scaffold_1316_26
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25717..28056)
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41540.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
Displaying 26 items

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