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qs_9_scaffold_1577

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1577_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(156..440)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49351.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_9_scaffold_1577_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(406..915)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQA8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93172.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_9_scaffold_1577_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1198..2433
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49352.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
mechanosensitive ion channel MscS
qs_9_scaffold_1577_4
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2502..2909)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0H418_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ78508.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
qs_9_scaffold_1577_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3054..4394)
DNA (1341bp) protein (447aa)
5'-nucleotidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DKX7_9EURY
5'-nucleotidase {ECO:0000313|EMBL:ELZ34814.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
5'-nucleotidase
qs_9_scaffold_1577_6
unknown

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4547..4822
DNA (276bp) protein (92aa)

This feature has no annotations

qs_9_scaffold_1577_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4929..6296
DNA (1368bp) protein (456aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA cytidylyltransferase (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIB7_9EURY
qs_9_scaffold_1577_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6275..7414)
DNA (1140bp) protein (380aa)
HdaI-type histone deacetylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUA5_9EURY
HdaI-type histone deacetylase {ECO:0000313|EMBL:EMA49322.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
hda1; HdaI-type histone deacetylase
qs_9_scaffold_1577_9
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7411..7869)
DNA (459bp) protein (153aa)
Transcription factor CBF/NF-Y/histone domain protein n=5 Tax=Halorubrum RepID=M0D944_9EURY
Transcription factor CBF/NF-Y/histone domain protein {ECO:0000313|EMBL:ELZ45146.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
transcription factor CBF/NF-Y/histone domain protein
qs_9_scaffold_1577_10
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8098..8907)
DNA (810bp) protein (270aa)
Replication factor A n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZWE4_9EURY
Replication factor A {ECO:0000313|EMBL:ELY89912.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
OB-fold tRNA/helicase-type nucleic acid binding protein
Displaying 10 items

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