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qs_9_scaffold_2017

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_2017_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..298)
DNA (297bp) protein (99aa)
DNA binding domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6W2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EMA41532.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
DNA-binding protein
qs_9_scaffold_2017_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

386..685
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N744_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53378.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_9_scaffold_2017_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(850..2619)
DNA (1770bp) protein (590aa)
Thiamine pyrophosphate domain-containing TPP-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5E6_9EURY
Thiamine pyrophosphate domain-containing TPP-binding protein {ECO:0000313|EMBL:EMA52778.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
thiamine pyrophosphate protein TPP binding domain-containing protein
qs_9_scaffold_2017_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2865..3914)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N424_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52611.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_9_scaffold_2017_5

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comp(4500..5240)
DNA (741bp) protein (247aa)
Nitrate/nitrite transporter n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZPK4_9ARCH
Nitrate/nitrite transporter {ECO:0000313|EMBL:ESS04555.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sugar transporter
qs_9_scaffold_2017_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5520..6383)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2Z932_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57140.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
alpha/beta hydrolase fold protein
qs_9_scaffold_2017_7
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6525..7664
DNA (1140bp) protein (380aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 11 (EC:3.1.2.6)
Beta-lactamase domain protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y7K9_9EURY
Beta-lactamase domain protein {ECO:0000313|EMBL:ELY70009.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 104
qs_9_scaffold_2017_8
unknown

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7744..8331
DNA (588bp) protein (196aa)

This feature has no annotations

qs_9_scaffold_2017_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8342..9103
DNA (762bp) protein (254aa)
HAD-superfamily hydrolase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4L7_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:EMA52034.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis
haloacid dehalogenase superfamily enzyme, subfamily IA
qs_9_scaffold_2017_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9207..9947)
DNA (741bp) protein (247aa)
Putative phosphate permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9C0_9EURY
Putative phosphate permease {ECO:0000313|EMBL:EMA53704.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
anion permease
qs_9_scaffold_2017_11
unknown

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9974..10252
DNA (279bp) protein (93aa)

This feature has no annotations

qs_9_scaffold_2017_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10249..10419)
DNA (171bp) protein (57aa)
Putative phosphate permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NA32_9EURY
Putative phosphate permease {ECO:0000313|EMBL:EMA54827.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
pitA; phosphate permease
qs_9_scaffold_2017_13
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10535..11416)
DNA (882bp) protein (294aa)
Luciferase-like protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YEZ0_9EURY
Luciferase-like protein {ECO:0000313|EMBL:ELY72670.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
luciferase-like protein
qs_9_scaffold_2017_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11787..14438
DNA (2652bp) protein (884aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP82_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46524.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
rnd superfamily exporter
qs_9_scaffold_2017_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14501..14995)
DNA (495bp) protein (165aa)
Peroxiredoxin-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6M5_9EURY
Peroxiredoxin-like protein {ECO:0000313|EMBL:EMA52789.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
homolog to peroxiredoxin
qs_9_scaffold_2017_16
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15053..15391
DNA (339bp) protein (113aa)
Glutaredoxin n=2 Tax=Haloarcula hispanica RepID=G0HW60_HALHT
grx; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AEM56482.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC 33960
qs_9_scaffold_2017_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15534..15689)
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRQ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92673.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qs_9_scaffold_2017_18
unknown

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comp(16444..16872)
DNA (429bp) protein (143aa)

This feature has no annotations

qs_9_scaffold_2017_19
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17100..17219
DNA (120bp) protein (40aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BYJ7_9EURY
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ELZ15483.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrige
qs_9_scaffold_2017_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17216..17446
DNA (231bp) protein (77aa)
Amidohydrolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DD24_9EURY
hypothetical protein
Amidohydrolase {ECO:0000313|EMBL:ELZ32637.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
Displaying 20 items

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