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qs_9_scaffold_2161

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_2161_1

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comp(1..261)
DNA (261bp) protein (87aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Pyruvate kinase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XZA5_9ARCH
pyruvate kinase
qs_9_scaffold_2161_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(681..2117)
DNA (1437bp) protein (479aa)
aldH2; aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde Dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M739_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA41218.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
qs_9_scaffold_2161_3
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2350..2580)
DNA (231bp) protein (77aa)
Transcriptional regulator, TrmB n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z974_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ELY82202.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 375
qs_9_scaffold_2161_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2523..3380)
DNA (858bp) protein (286aa)
Transcriptional regulator, TrmB n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQA9_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EFW93173.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
transcriptional regulator
qs_9_scaffold_2161_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3947..5347
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZKR5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61310.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_9_scaffold_2161_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5495..6583
DNA (1089bp) protein (363aa)
Xaa-Pro aminopeptidase M24 family protein (EC:3.4.-.-)
Xaa-pro aminopeptidase n=1 Tax=Halogranum salarium B-1 RepID=J3A1U8_9EURY
Xaa-pro aminopeptidase {ECO:0000313|EMBL:EJN59298.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
qs_9_scaffold_2161_7
unknown

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comp(7597..7983)
DNA (387bp) protein (129aa)

This feature has no annotations

qs_9_scaffold_2161_8
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8223..9317
DNA (1095bp) protein (365aa)
celM; cellulase, endo-1,3(4)-beta-glucanase, peptidase M42 family protein / endoglucanase (EC:3.2.1.4)
Cellulase M related protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y2L3_9ARCH
Cellulase M related protein {ECO:0000313|EMBL:ERH07812.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
qs_9_scaffold_2161_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9550..10536
DNA (987bp) protein (329aa)
Oxidoreductase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYM7_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EMA50418.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
oxidoreductase domain-containing protein
qs_9_scaffold_2161_10
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10706..10963
DNA (258bp) protein (86aa)
Like-Sm ribonucleoprotein core n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SRE5_NATMM
Sm ribonucleoprotein-like protein
Sm ribonucleoprotein-like protein {ECO:0000313|EMBL:ELY25306.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain
qs_9_scaffold_2161_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10960..11130
DNA (171bp) protein (57aa)
50S ribosomal protein L37e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0L4_NATM8
rpl37e; 50S ribosomal protein L37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
qs_9_scaffold_2161_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11257..12765
DNA (1509bp) protein (503aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NR41_HALBP
qs_9_scaffold_2161_13
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12937..13683)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AI78_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELY97078.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
qs_9_scaffold_2161_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13788..14876
DNA (1089bp) protein (363aa)
Class I and II aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7E1_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EMA53473.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
class I and II aminotransferase
qs_9_scaffold_2161_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15066..15443
DNA (378bp) protein (126aa)
Translation initiation factor 5A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LU04_9EURY
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
translation initiation factor IF-5A
Displaying 15 items

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