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qs_9_scaffold_444

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_444_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..612
DNA (612bp) protein (204aa)
Sec-independent protein translocase component TatC 1 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4M2_9EURY
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
tatC1; twin arginine translocation system subunit TatC
qs_9_scaffold_444_2
unknown

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1087..1365
DNA (279bp) protein (93aa)

This feature has no annotations

qs_9_scaffold_444_3
unknown

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comp(1462..1905)
DNA (444bp) protein (148aa)

This feature has no annotations

qs_9_scaffold_444_4
unknown

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comp(1899..2123)
DNA (225bp) protein (75aa)

This feature has no annotations

qs_9_scaffold_444_5
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2252..2728
DNA (477bp) protein (159aa)
Putative cyclase n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZA91_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02021.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qs_9_scaffold_444_6
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2773..2967
DNA (195bp) protein (65aa)
HTH DNA binding domain family protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZBC8_9EURY
HTH DNA binding domain family protein {ECO:0000313|EMBL:ELY82912.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 1
HTH DNA binding domain family protein
qs_9_scaffold_444_7
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3006..3389
DNA (384bp) protein (128aa)
HTH DNA binding domain family protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZBC8_9EURY
HTH DNA binding domain family protein {ECO:0000313|EMBL:ELY82912.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 1
hypothetical protein
qs_9_scaffold_444_8
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3594..5780)
DNA (2187bp) protein (729aa)
Elongation factor 2 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CND8_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natria
translation elongation factor aEF-2
qs_9_scaffold_444_9
unknown

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comp(6228..6581)
DNA (354bp) protein (118aa)

This feature has no annotations

qs_9_scaffold_444_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6898..7650
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Halococcus hamelinensis RepID=UPI000299E93E
Uncharacterized protein {ECO:0000313|EMBL:EMA43375.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_9_scaffold_444_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7849..8463)
DNA (615bp) protein (205aa)
30S ribosomal protein S7 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCA1_9EURY
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
30S ribosomal protein S7P
qs_9_scaffold_444_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8467..8895)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU20_NATM8
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
qs_9_scaffold_444_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8990..9460)
DNA (471bp) protein (157aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
NusA family KH domain protein
qs_9_scaffold_444_14
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9475..10713)
DNA (1239bp) protein (413aa)
rpoA''; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
DNA-directed RNA polymerase subunit A'' n=2 Tax=Haloarcula hispanica RepID=G0HSR2_HALHT
qs_9_scaffold_444_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10706..13663)
DNA (2958bp) protein (986aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit A n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRB9_9EURY
DNA-directed RNA polymerase subunit A'
qs_9_scaffold_444_16
Halococcus sp. 197A, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13712..15538)
DNA (1827bp) protein (609aa)
rpoB; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=24646171 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1197130 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
qs_9_scaffold_444_17
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15644..17245)
DNA (1602bp) protein (534aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:EMA65743.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA65743.1};; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
DNA-directed RNA polymerase subunit B n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P7C3_9EURY
DNA-directed RNA polymerase subunit beta''
Displaying 17 items

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