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qs_9_scaffold_2952

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_2952_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..232
DNA (231bp) protein (77aa)
carA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN00_NATPD
qs_9_scaffold_2952_2
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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287..919
DNA (633bp) protein (211aa)
N-acetyltransferase GCN5 n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WZD3_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELY54762.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermong
N-acetyltransferase GCN5
qs_9_scaffold_2952_3
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1689..2330)
DNA (642bp) protein (214aa)
N-acetyltransferase GCN5 n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WZD3_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELY54762.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermong
N-acetyltransferase GCN5
qs_9_scaffold_2952_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2385..3470)
DNA (1086bp) protein (362aa)
carA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN00_NATPD
qs_9_scaffold_2952_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3552..3965
DNA (414bp) protein (138aa)
Lrp/AsnC family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQC2_NATM8
Lrp/AsnC family transcription regulator
Lrp/AsnC family transcription regulator {ECO:0000313|EMBL:CCQ36342.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
qs_9_scaffold_2952_6
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3962..4582)
DNA (621bp) protein (207aa)
PHP domain protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MNK9_HALMO
PHP domain protein {ECO:0000313|EMBL:EMA46334.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
putative metal-dependent phosphoesterase, PHP family
qs_9_scaffold_2952_7
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4636..5565
DNA (930bp) protein (310aa)
Diacylglycerol kinase catalytic region n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JR74_NATP1
conserved protein of unknown function BmrU
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:ELY71806.1}; Uncharacterized protein {ECO:0000313|EMBL:AGB33142.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; N
qs_9_scaffold_2952_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5617..6063
DNA (447bp) protein (149aa)
idiA; isopentenyl-diphosphate delta-isomerase, type I (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase, type I {ECO:0000313|EMBL:CCQ35669.1}; EC=5.3.3.2 {ECO:0000313|EMBL:CCQ35669.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
Isopentenyl-diphosphate delta-isomerase, type I n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNW0_NATM8
qs_9_scaffold_2952_9
unknown

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6105..6356
DNA (252bp) protein (84aa)

This feature has no annotations

qs_9_scaffold_2952_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7050..7889
DNA (840bp) protein (280aa)
suk; sugar kinase ( ketohexokinase, fructokinase, ribokinase, 2-dehydro-3-deoxygluconokinase ) (EC:2.7.1.4 2.7.1.15 2.7.1.3 2.7.1.45)
Sugar kinase {ECO:0000313|EMBL:CAI49683.1}; EC=2.7.1.- {ECO:0000313|EMBL:CAI49683.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" so
Sugar kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQB3_NATPD
qs_9_scaffold_2952_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8267..8770
DNA (504bp) protein (168aa)
HAD superfamily hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQB4_NATPD
hypothetical protein
HAD superfamily hydrolase {ECO:0000313|EMBL:CAI49682.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
qs_9_scaffold_2952_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9138..9833)
DNA (696bp) protein (232aa)
act; acyl-CoA thioester hydrolase (EC:3.1.2.-)
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:CCQ35530.1}; EC=3.1.2.- {ECO:0000313|EMBL:CCQ35530.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Acyl-CoA thioester hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNM1_NATM8
qs_9_scaffold_2952_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9928..10767
DNA (840bp) protein (280aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-) id=24646750 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Short-chain dehydrogenase {ECO:0000313|EMBL:ERH10913.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_9_scaffold_2952_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10769..11701)
DNA (933bp) protein (311aa)
asparaginase (EC:3.5.1.1)
Asparaginase family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRD6_NATPD
Asparaginase family protein {ECO:0000313|EMBL:CAI49307.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
qs_9_scaffold_2952_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11841..12953
DNA (1113bp) protein (371aa)
icd; isocitrate dehydrogenase (NADP+) (EC:1.1.1.42)
Isocitrate dehydrogenase (NADP) {ECO:0000313|EMBL:CAI49306.1}; EC=1.1.1.42 {ECO:0000313|EMBL:CAI49306.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
Isocitrate dehydrogenase (NADP+) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRD7_NATPD
qs_9_scaffold_2952_16

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comp(13643..14947)
DNA (1305bp) protein (435aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZSL3_9ARCH
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:ESS05715.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
dihydrodipicolinate synthase/n-acetylneuraminate lyase
qs_9_scaffold_2952_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15365..15697
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL58_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37129.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_9_scaffold_2952_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15726..16142
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC28_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43327.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_9_scaffold_2952_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16520..17278)
DNA (759bp) protein (253aa)
mvaA_1; hydroxymethylglutaryl-CoA reductase (NADPH) 1 (EC:1.1.1.34)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.34 {ECO:0000256|RuleBase:RU361219};; TaxID=348780 sp
Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRE1_NATPD
qs_9_scaffold_2952_20
unknown

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comp(18083..18946)
DNA (864bp) protein (288aa)

This feature has no annotations

qs_9_scaffold_2952_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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19713..21218
DNA (1506bp) protein (502aa)
Probable amidohydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRE2_NATPD
hypothetical protein
Probable amidohydrolase {ECO:0000313|EMBL:CAI49301.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_9_scaffold_2952_22
unknown

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comp(21907..22038)
DNA (132bp) protein (44aa)

This feature has no annotations

qs_9_scaffold_2952_23
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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22179..23135
DNA (957bp) protein (319aa)
Rhomboid family protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XGN1_9EURY
Rhomboid family protein {ECO:0000313|EMBL:ELY60541.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
qs_9_scaffold_2952_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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23689..23904
DNA (216bp) protein (72aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
nadA; quinolinate synthetase (EC:4.1.99.-)
Quinolinate synthase A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWI8_9EURY
qs_9_scaffold_2952_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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23910..24641
DNA (732bp) protein (244aa)
nadA; quinolinate synthetase (EC:4.1.99.-)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Quinolinate synthase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRE3_NATPD
Displaying 25 items

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