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qs_9_scaffold_3392

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_3392_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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603..3443
DNA (2841bp) protein (947aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYA_NATPD
qs_9_scaffold_3392_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4957..6102
DNA (1146bp) protein (382aa)
hypothetical protein
hypothetical protein id=24649490 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DUF4393 domain protein {ECO:0000313|EMBL:CAI48450.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
qs_9_scaffold_3392_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6489..6938
DNA (450bp) protein (150aa)
PHP domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA5_NATM8
PHP domain protein
PHP domain protein {ECO:0000313|EMBL:CCQ35544.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
qs_9_scaffold_3392_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6989..7150
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48453.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_9_scaffold_3392_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7199..7657
DNA (459bp) protein (153aa)
CHP00725 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU16_NATPD
hypothetical protein
TIGR00725 family protein {ECO:0000313|EMBL:CAI48367.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (s
qs_9_scaffold_3392_6
unknown

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comp(7624..7854)
DNA (231bp) protein (77aa)

This feature has no annotations

qs_9_scaffold_3392_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8037..8780)
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PCNA_NATPD
pcn; DNA polymerase sliding clamp
DNA polymerase sliding clamp {ECO:0000255|HAMAP-Rule:MF_00317}; Proliferating cell nuclear antigen homolog {ECO:0000255|HAMAP-Rule:MF_00317}; Short=PCNA {ECO:0000255|HAMAP-Rule:MF_00317};; TaxID=34878
qs_9_scaffold_3392_8
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8901..9146)
DNA (246bp) protein (82aa)
Membrane protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G8D3_9EURY
Membrane protein {ECO:0000313|EMBL:ELZ67094.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;"
membrane protein
qs_9_scaffold_3392_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9276..10862)
DNA (1587bp) protein (529aa)
dsa; branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.-)
Dihydrolipoamide S-acyltransferase {ECO:0000313|EMBL:CAI48369.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI48369.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Dihydrolipoamide S-acyltransferase (Probable E2 component of branched-chain amino acid dehydrogenase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU14_NATPD
qs_9_scaffold_3392_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10866..11864)
DNA (999bp) protein (333aa)
oxdhB; 2-oxoacid dehydrogenase E1 component, beta subunit (EC:1.2.4.-)
2-oxo-3-methylvalerate dehydrogenase E1 component beta subunit {ECO:0000313|EMBL:CAI48370.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CAI48370.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Hal
Probable branched-chain amino acid dehydrogenase E1 component beta subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU13_NATPD
qs_9_scaffold_3392_11
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11861..12982)
DNA (1122bp) protein (374aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit {ECO:0000313|EMBL:ADB62459.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ADB62459.1};; TaxID=543526 species="Archaea; Euryarchaeota; Halobac
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RR63_HALTV
qs_9_scaffold_3392_12
unknown

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13275..14171
DNA (897bp) protein (299aa)

This feature has no annotations

qs_9_scaffold_3392_13
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14045..14980)
DNA (936bp) protein (312aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206, ECO:0000313|EMBL:EMA67775.1};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO
lipA; lipoyl synthase (EC:2.8.1.-)
Probable lipoyl synthase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PG60_9EURY
qs_9_scaffold_3392_14

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15085..16530
DNA (1446bp) protein (482aa)
MATE efflux family protein n=1 Tax=halophilic archaeon DL31 RepID=G2MH84_9ARCH
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AEN06479.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_9_scaffold_3392_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16535..17206)
DNA (672bp) protein (224aa)
Twin arginine translocation system subunit TatC n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNN2_NATM8
tatC1; twin arginine translocation system subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sourc
qs_9_scaffold_3392_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17370..19421
DNA (2052bp) protein (684aa)
Twin arginine translocation system subunit TatC n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISW9_NATPD
tatC_2; sec-independent protein translocase component TatC 2
Sec-independent protein translocase subunit TatC {ECO:0000313|EMBL:CAI48766.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="N
Displaying 16 items

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