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qs_9_scaffold_379

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_379_1
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..1300
DNA (1299bp) protein (433aa)
ABC-type iron(III) transport system, permease protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R5J0_HALMT
sfuB; ABC-type iron(III) transport system, permease protein
ABC-type iron(III) transport system, permease protein {ECO:0000313|EMBL:AFK19500.1}; Iron ABC transporter permease {ECO:0000313|EMBL:AHZ21158.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobact
qs_9_scaffold_379_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1290..2582
DNA (1293bp) protein (431aa)
ABC transporter-related protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JLZ3_NATP1
ABC-type spermidine/putrescine transport system, ATPase component
ABC transporter-related protein {ECO:0000313|EMBL:ELY73696.1}; ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:AGB32560.1}; TaxID=797303 species="Archaea; Euryarcha
qs_9_scaffold_379_3

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2579..4867
DNA (2289bp) protein (763aa)
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferases of PMT family n=1 Tax=uncultured archaeon A07HR60 RepID=V5ABD3_9ARCH
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferases of PMT family {ECO:0000313|EMBL:ESS13045.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A
hypothetical protein
qs_9_scaffold_379_4
unknown

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4910..5173
DNA (264bp) protein (88aa)

This feature has no annotations

qs_9_scaffold_379_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5461..6276
DNA (816bp) protein (272aa)
Transposase, IS605 OrfB family protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJF0_HALMO
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA44550.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus mo
transposase, IS605 OrfB family
qs_9_scaffold_379_6
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6288..6707
DNA (420bp) protein (140aa)
Transposase, IS605 OrfB family protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJF0_HALMO
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA44550.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus mo
transposase, IS605 OrfB family
qs_9_scaffold_379_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6801..7517)
DNA (717bp) protein (239aa)
Family 2 glycosyl transferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYN7_9EURY
Family 2 glycosyl transferase {ECO:0000313|EMBL:EMA50428.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
glycosyltransferase
qs_9_scaffold_379_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7580..8674)
DNA (1095bp) protein (365aa)
Cell surface glycoprotein related protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ41_9EURY
Cell surface glycoprotein related protein {ECO:0000313|EMBL:EMA45368.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
hypothetical protein
qs_9_scaffold_379_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8917..9198)
DNA (282bp) protein (94aa)
Transcriptional regulator, MarR family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXV3_9EURY
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:EMA50426.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
transcriptional regulator, MarR family
qs_9_scaffold_379_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9407..10573
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI37_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45366.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_9_scaffold_379_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10580..11185
DNA (606bp) protein (202aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N012_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA50424.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane-bound metal-dependent hydrolase
qs_9_scaffold_379_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11244..12248)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKU7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45364.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
putative methicillin resistance protein
qs_9_scaffold_379_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12245..13891)
DNA (1647bp) protein (549aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXF6_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EMA50422.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
hypothetical protein
qs_9_scaffold_379_14
unknown

Not on your lists

comp(14105..14479)
DNA (375bp) protein (125aa)

This feature has no annotations

qs_9_scaffold_379_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15190..15780
DNA (591bp) protein (197aa)
Acetyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N162_9EURY
Acetyltransferase {ECO:0000313|EMBL:EMA50420.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
acetyltransferase
qs_9_scaffold_379_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15777..16895
DNA (1119bp) protein (373aa)
Glutamine--scyllo-inositol transaminase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLN2_9EURY
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:EMA45360.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
qs_9_scaffold_379_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16888..17895
DNA (1008bp) protein (336aa)
Oxidoreductase domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTM9_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EMA35759.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
oxidoreductase domain-containing protein
qs_9_scaffold_379_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17892..18557
DNA (666bp) protein (222aa)
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXF1_9EURY
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase {ECO:0000313|EMBL:EMA50417.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
nucleotide sugar dehydrogenase
Displaying 18 items

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