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qs_9_scaffold_1026

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1026_1
unknown

Not on your lists

comp(1..108)
DNA (108bp) protein (36aa)

This feature has no annotations

qs_9_scaffold_1026_2
unknown

Not on your lists

128..253
DNA (126bp) protein (42aa)

This feature has no annotations

qs_9_scaffold_1026_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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396..737
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J273_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP89517.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_1026_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(781..1512)
DNA (732bp) protein (244aa)
putative circadian clock protein KaiC id=24613890 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Putative circadian clock protein KaiC {ECO:0000313|EMBL:ESP89516.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
putative circadian clock protein KaiC
qs_9_scaffold_1026_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1712..2293
DNA (582bp) protein (194aa)
response regulator receiver protein id=24613889 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Response regulator receiver protein {ECO:0000313|EMBL:ESP89515.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candi
response regulator receiver protein
qs_9_scaffold_1026_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2369..3850)
DNA (1482bp) protein (494aa)
Single-stranded DNA-specific exonuclease n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HNL3_9EURY
Single-stranded DNA-specific exonuclease {ECO:0000313|EMBL:ESP89514.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="
single-stranded DNA-specific exonuclease
qs_9_scaffold_1026_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4267..4899)
DNA (633bp) protein (211aa)
GTP-binding protein id=24616177 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
GTP-binding protein
qs_9_scaffold_1026_8
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5094..5849
DNA (756bp) protein (252aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BK41_9EURY
5-formyltetrahydrofolate cyclo-ligase
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:AHF98939.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola l
qs_9_scaffold_1026_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5909..7237
DNA (1329bp) protein (443aa)
hypothetical protein id=24614294 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP89211.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_1026_10
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7407..7892
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X322_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY54983.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
putative membrane protein (DUF2078)
qs_9_scaffold_1026_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7897..8919)
DNA (1023bp) protein (341aa)
small GTP-binding protein; K06943 nucleolar GTP-binding protein id=24614292 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Small GTP-binding protein {ECO:0000313|EMBL:ESP89209.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halo
small GTP-binding protein
qs_9_scaffold_1026_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


9279..10187
DNA (909bp) protein (303aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HGG5_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1324957 species="Arc
translation initiation factor 2 subunit gamma
qs_9_scaffold_1026_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10184..10429
DNA (246bp) protein (82aa)
Suspect SCG annotation. See neighboring gene [qs_9_scaffold_1026_12].
translation initiation factor 2 subunit gamma; K03242 translation initiation factor 2 subunit 3 id=24614291 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1324957 species="Arc
translation initiation factor 2 subunit gamma
qs_9_scaffold_1026_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10437..10823
DNA (387bp) protein (129aa)
SSU processome protein utp24 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J180_9EURY
SSU processome protein utp24 {ECO:0000313|EMBL:ESP89207.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus H
SSU processome protein utp24
qs_9_scaffold_1026_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10825..11406
DNA (582bp) protein (194aa)
rpoE1; DNA-directed RNA polymerase subunit E (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] id=24614289 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ESP89206.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ESP89206.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
DNA-directed RNA polymerase subunit e' (EC:2.7.7.6)
qs_9_scaffold_1026_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11410..11607
DNA (198bp) protein (66aa)
rpoE2; DNA-directed RNA polymerase subunit E (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TYU3_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="
qs_9_scaffold_1026_17
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11630..12160
DNA (531bp) protein (177aa)
UPF0218 protein C468_03828 n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PAH6_9EURY
UPF0218 protein C468_03828 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 1
hypothetical protein
qs_9_scaffold_1026_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12489..13448
DNA (960bp) protein (320aa)
PQQ repeat protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP15_NATM8
PQQ repeat protein
PQQ repeat protein {ECO:0000313|EMBL:CCQ35740.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
qs_9_scaffold_1026_19
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13533..13841
DNA (309bp) protein (103aa)
rps24e; 30S ribosomal protein S24e; K02974 small subunit ribosomal protein S24e id=24614298 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus
rps24e; 30S ribosomal protein S24e
qs_9_scaffold_1026_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14698..15438
DNA (741bp) protein (247aa)
metallohydrolase, glycoprotease/Kae1 family id=24614299 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
O-sialoglycoprotein endopeptidase
qs_9_scaffold_1026_21
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15621..15899
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B2L3_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELZ03919.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
qs_9_scaffold_1026_22
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15912..16331)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VX15_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY41542.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
qs_9_scaffold_1026_23
unknown

Not on your lists

comp(16540..16959)
DNA (420bp) protein (140aa)

This feature has no annotations

qs_9_scaffold_1026_24
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17001..18239)
DNA (1239bp) protein (413aa)
Beta-lactamase domain protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LPT7_HALLT
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ACM57375.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (
qs_9_scaffold_1026_25
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18371..19747
DNA (1377bp) protein (459aa)
cpsG; phosphohexomutase (phosphoglucomutase, phosphomannomutase) (EC:5.4.2.8)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGD4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60029.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
qs_9_scaffold_1026_26
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19889..20413
DNA (525bp) protein (175aa)
Acetyltransferase (GNAT) family protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSX8_HALBP
acetyltransferase (gnat) family protein
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:ADQ65866.1}; Acetyltransferase (Gnat) family protein {ECO:0000313|EMBL:ELY26868.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria
qs_9_scaffold_1026_27
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20653..21837)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87741.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_1026_28
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21834..22253)
DNA (420bp) protein (140aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=1324957 species="Archaea; Eu
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HAK9_9EURY
phosphoribosyl-AMP cyclohydrolase
qs_9_scaffold_1026_29
unknown

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comp(22332..22745)
DNA (414bp) protein (138aa)

This feature has no annotations

qs_9_scaffold_1026_30
unknown

Not on your lists

comp(22817..22906)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 30 items

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