ggKbase home page

qs_9_scaffold_2114

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_2114_1
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(54..398)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CK50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22988.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_9_scaffold_2114_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

501..1826
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IZ02_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88347.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
amine oxidase
qs_9_scaffold_2114_3
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1903..2631
DNA (729bp) protein (243aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EBI3_9EURY
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:ELZ44398.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum c
metallo-beta-lactamase
qs_9_scaffold_2114_4
unknown

Not on your lists

2714..3001
DNA (288bp) protein (96aa)

This feature has no annotations

qs_9_scaffold_2114_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3970..5853
DNA (1884bp) protein (628aa)
Aldo/keto reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CX55_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ26997.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
aldo/keto reductase
qs_9_scaffold_2114_6

Not on your lists

5850..6701
DNA (852bp) protein (284aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=halophilic archaeon DL31 RepID=G2MM03_9ARCH
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:AEN05830.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_9_scaffold_2114_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6770..7663
DNA (894bp) protein (298aa)
asparaginase (EC:3.5.1.1); K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] id=24616255 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
asparaginase (EC:3.5.1.1) rbh
Asparaginase {ECO:0000313|EMBL:ESP87833.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrell
qs_9_scaffold_2114_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7695..7958)
DNA (264bp) protein (88aa)
acetyltransferase, N-acetylglutamate synthase id=24616256 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:ESP87834.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" sou
GCN5-like N-acetyltransferase
qs_9_scaffold_2114_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8221..8682)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GS07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87836.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_2114_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9109..9813
DNA (705bp) protein (235aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IXF9_9EURY
qs_9_scaffold_2114_11
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10149..11399
DNA (1251bp) protein (417aa)
MiaB-like tRNA modifying enzyme id=24651780 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
MiaB-like tRNA modifying enzyme, archaeal-type {ECO:0000313|EMBL:ERH11498.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
MiaB-like tRNA modifying enzyme
qs_9_scaffold_2114_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11637..12623)
DNA (987bp) protein (329aa)
Cation diffusion facilitator family transporter n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IZ63_9EURY
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ESP88407.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" s
cation diffusion facilitator family transporter
qs_9_scaffold_2114_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12677..12940)
DNA (264bp) protein (88aa)
hypothetical protein id=24615242 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88406.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_2114_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12945..13259)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:ESP88405.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein id=24615241 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
hypothetical protein
qs_9_scaffold_2114_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13492..14262)
DNA (771bp) protein (257aa)
petD; cytochrome bc1 complex cytochrome b/c subunit (EC:1.10.2.-)
Cytochrome b(C-terminal)/b6 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HKG7_9EURY
Cytochrome b(C-terminal)/b6 {ECO:0000313|EMBL:ESP88404.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Ha
qs_9_scaffold_2114_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14267..15073)
DNA (807bp) protein (269aa)
petB; menaquinol--cytochrome-c reductase (cytochrome bc complex) cytochrome b subunit (EC:1.10.2.-)
Cytochrome b subunit of the bc complex n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HEB2_9EURY
Cytochrome b subunit of the bc complex {ECO:0000313|EMBL:ESP88403.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Ca
qs_9_scaffold_2114_17
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15078..15464)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0GRJ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ86747.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
qs_9_scaffold_2114_18
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15468..16085)
DNA (618bp) protein (206aa)
Halocyanin n=4 Tax=Haloferax RepID=M0FFV0_9EURY
hcpB; halocyanin
Halocyanin {ECO:0000313|EMBL:ELZ58820.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-646.;"
qs_9_scaffold_2114_19
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16181..17179)
DNA (999bp) protein (333aa)
hypothetical protein id=24615236 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88400.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_2114_20
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17343..17828
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HB67 RepID=U1R0K9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH13203.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
qs_9_scaffold_2114_21
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17881..18096)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XH87_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY61070.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
qs_9_scaffold_2114_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18185..18868)
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1324957 species=
endonuclease iii; DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.- 4.2.99.18)
Endonuclease III n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HEA9_9EURY
qs_9_scaffold_2114_23
unknown

Not on your lists

19011..19136
DNA (126bp) protein (42aa)

This feature has no annotations

qs_9_scaffold_2114_24
unknown

Not on your lists

comp(19397..19720)
DNA (324bp) protein (108aa)

This feature has no annotations

qs_9_scaffold_2114_25
unknown

Not on your lists

19750..20076
DNA (327bp) protein (109aa)

This feature has no annotations

qs_9_scaffold_2114_26
unknown

Not on your lists

20092..20214
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 26 items

View Taxonomy