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qs_9_scaffold_266

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_266_trna_2
unknown

Not on your lists

comp(1..72)
DNA (72bp)
transferRNA
qs_9_scaffold_266_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(136..756)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HA43_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87585.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_266_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(874..1188)
DNA (315bp) protein (105aa)
30S ribosomal protein S10 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRA4_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus H
rps10p; 30S ribosomal protein S10P
qs_9_scaffold_266_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1189..2154)
DNA (966bp) protein (322aa)
tef1A; translation elongation factor EF-1 subunit alpha (EC:3.6.5.3) id=24616504 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
elongation factor 1-alpha (EC:2.7.7.4)
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
qs_9_scaffold_266_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2610..3584)
DNA (975bp) protein (325aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=24616505 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:ESP87588.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halob
qs_9_scaffold_266_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3581..4204)
DNA (624bp) protein (208aa)
Allosteric regulator of homoserine dehydrogenase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HI44_9EURY
Allosteric regulator of homoserine dehydrogenase {ECO:0000313|EMBL:ESP87589.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;"
amino acid-binding ACT domain-containing protein
qs_9_scaffold_266_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4611..6761)
DNA (2151bp) protein (717aa)
Elongation factor 2 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HA48_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Haloba
translation elongation factor 2 (ef-2/ef-g)
qs_9_scaffold_266_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7097..7864
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D3H2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30056.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein rbh
qs_9_scaffold_266_8
unknown

Not on your lists

comp(8013..8123)
DNA (111bp) protein (37aa)

This feature has no annotations

qs_9_scaffold_266_9

Not on your lists

9015..9497
DNA (483bp) protein (161aa)
Class II aldolase/adducin family protein n=1 Tax=halophilic archaeon DL31 RepID=G2MKA1_9ARCH
class II aldolase/adducin family protein
Class II aldolase/adducin family protein {ECO:0000313|EMBL:AEN04698.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_9_scaffold_266_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9552..9701
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NA66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54776.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_9_scaffold_266_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9793..10410)
DNA (618bp) protein (206aa)
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=24616451 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Ha
rps7P; 30S ribosomal protein S7P
qs_9_scaffold_266_12
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10410..10838)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R1G7_HALMT
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sour
qs_9_scaffold_266_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11078..11503)
DNA (426bp) protein (142aa)
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=24616454 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.
transcription elongation factor NusA-like protein
qs_9_scaffold_266_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11506..12753)
DNA (1248bp) protein (416aa)
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=24616455 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
rpoA''; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
qs_9_scaffold_266_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12746..15679)
DNA (2934bp) protein (978aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=24616456 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-directed RNA polymerase subunit a' (EC:2.7.7.6)
qs_9_scaffold_266_16
Halobaculum gomorrense, Halobaculum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15684..17513)
DNA (1830bp) protein (610aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=43928 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halo
DNA-directed RNA polymerase subunit b' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Halobaculum gomorrense RepID=C5NSC1_9EURY
qs_9_scaffold_266_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17515..19080)
DNA (1566bp) protein (522aa)
DNA-directed RNA polymerase subunit beta''; K03045 DNA-directed RNA polymerase subunit B" [EC:2.7.7.6] id=24616458 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:ESP87603.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ESP87603.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
DNA-directed RNA polymerase subunit beta''
qs_9_scaffold_266_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19077..19307)
DNA (231bp) protein (77aa)
RNA polymerase Rpb5; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] id=24616459 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
RNA polymerase Rpb5
qs_9_scaffold_266_trna_1
unknown

Not on your lists

19598..19670
DNA (73bp)
transferRNA
qs_9_scaffold_266_19
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19864..20064)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JHY9_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB31150.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qs_9_scaffold_266_20
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20306..20950)
DNA (645bp) protein (215aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DC44_HALXS
bacterio-opsin activator HTH domain-containing protein
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:AEH37157.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanad
qs_9_scaffold_266_21
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21160..21435)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ANV9_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ74912.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
qs_9_scaffold_266_22
unknown

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comp(21572..21709)
DNA (138bp) protein (46aa)

This feature has no annotations

qs_9_scaffold_266_23
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21751..22938)
DNA (1188bp) protein (396aa)
hypothetical protein; K06915 id=24616463 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87607.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_266_24
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22987..23508
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HC29_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87608.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_266_25
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23546..23722)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY66205.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
qs_9_scaffold_266_26
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23994..25403
DNA (1410bp) protein (470aa)
CoA-disulfide reductase n=1 Tax=Halobacterium sp. DL1 RepID=G4IIQ4_9EURY
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AHG02927.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halo
flavin-dependent pyridine nucleotide oxidoreductase (homolog to coenzyme A disulfide reductase)
qs_9_scaffold_266_27
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(25574..26164)
DNA (591bp) protein (197aa)
Flavin reductase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLP9_9EURY
Flavin reductase {ECO:0000313|EMBL:ELY49278.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus J
flavin reductase
qs_9_scaffold_266_28
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26768..28204
DNA (1437bp) protein (479aa)
circadian clock protein, KaiC (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SMU5_9EURY
Circadian clock protein, KaiC {ECO:0000313|EMBL:ELZ33724.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense
Displaying items 1-30 of 54 in total

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