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qs_9_scaffold_962

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_962_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1472)
DNA (1470bp) protein (490aa)
DEAD2 domain protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HIK6_9EURY
DEAD2 domain protein {ECO:0000313|EMBL:ESP89618.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
DNA helicase, rad3
qs_9_scaffold_962_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1600..2808)
DNA (1209bp) protein (403aa)
IS1341-type transposase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPL9_NATM8
IS1341-type transposase
IS1341-type transposase ISNamo23 {ECO:0000313|EMBL:CCQ35941.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mool
qs_9_scaffold_962_3
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3143..3922
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U4M8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ48447.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
putative Zn-finger containing protein
qs_9_scaffold_962_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4012..6666)
DNA (2655bp) protein (885aa)
Hef nuclease {ECO:0000313|EMBL:ESP87849.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrell
ercc4-like helicase; K10896 fanconi anemia group M protein id=24616218 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
ercc4-like helicase
qs_9_scaffold_962_5

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comp(7019..8056)
DNA (1038bp) protein (346aa)
Beta-carotene 15,15''-monooxygenase, Brp/Blh family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XW33_9ARCH
Beta-carotene 15,15''-monooxygenase, Brp/Blh family {ECO:0000313|EMBL:ESS06423.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
blh; Brp-like protein-like
qs_9_scaffold_962_6
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8056..8886)
DNA (831bp) protein (277aa)
crtY; lycopene cyclase (EC:1.14.-.-); K00517 [EC:1.14.-.-] id=24643140 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
crtY; lycopene beta-cyclase (EC:5.5.1.19)
Lycopene cyclase domain protein {ECO:0000313|EMBL:ERH12919.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
qs_9_scaffold_962_7
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9052..9792
DNA (741bp) protein (247aa)
rhodopsin id=24651118 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Bacteriorhodopsin {ECO:0000313|EMBL:ERH12702.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
bacteriorhodopsin
qs_9_scaffold_962_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9942..10184)
DNA (243bp) protein (81aa)
Ferredoxin n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HCT1_9EURY
Ferredoxin {ECO:0000313|EMBL:ESP87848.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrellen
hypothetical protein
qs_9_scaffold_962_9
unknown

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comp(10263..10448)
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 9 items

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