ggKbase home page

qs_9_scaffold_2366

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_2366_1
unknown

Not on your lists

112..306
DNA (195bp) protein (65aa)

This feature has no annotations

qs_9_scaffold_2366_2

Not on your lists

comp(313..597)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XKC9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESS02408.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
qs_9_scaffold_2366_3
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1023..1931
DNA (909bp) protein (303aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RPW0_HALTV
phenazine biosynthesis protein PhzF family
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:ADB60219.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigen
qs_9_scaffold_2366_4

Not on your lists

2296..3240
DNA (945bp) protein (315aa)
Transcription initiation factor IIB n=1 Tax=uncultured archaeon A07HB70 RepID=V4XZ35_9ARCH
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archa
transcription factor TFIIB cyclin-related
qs_9_scaffold_2366_5
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3544..4731)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAI5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA17174.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
qs_9_scaffold_2366_6
unknown

Not on your lists

comp(6663..7388)
DNA (726bp) protein (242aa)

This feature has no annotations

qs_9_scaffold_2366_7

Not on your lists

comp(8514..9758)
DNA (1245bp) protein (415aa)
Protein translocase subunit SecY n=1 Tax=uncultured archaeon A07HB70 RepID=V4XBP2_9ARCH
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=141287
preprotein translocase subunit SecY
qs_9_scaffold_2366_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9870..10370)
DNA (501bp) protein (167aa)
50S ribosomal protein L15P n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKF2_NATM8
rpl15; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
qs_9_scaffold_2366_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10370..10834)
DNA (465bp) protein (155aa)
50S ribosomal protein L30P n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP56_NATM8
rpl30; 50S ribosomal protein L30
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
qs_9_scaffold_2366_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10834..11466)
DNA (633bp) protein (211aa)
30S ribosomal protein S5 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NV67_HALUD
rps5p; 30S ribosomal protein S5P
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
qs_9_scaffold_2366_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11463..11978)
DNA (516bp) protein (172aa)
50S ribosomal protein L18P n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL18_NATPD
rpl18p; 50S ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_9_scaffold_2366_12
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12011..12451)
DNA (441bp) protein (147aa)
50S ribosomal protein L19e n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8G9_9EURY
rpl19e; 50S ribosomal protein L19e
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyti
qs_9_scaffold_2366_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12444..13322)
DNA (879bp) protein (293aa)
LSU ribosomal protein l32e n=1 Tax=Halogranum salarium B-1 RepID=J3EVL9_9EURY
LSU ribosomal protein l32e {ECO:0000313|EMBL:EJN58677.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
50S ribosomal protein L32e
qs_9_scaffold_2366_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13322..14095)
DNA (774bp) protein (258aa)
30S ribosomal protein S8 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS8_NATPD
rps8p; 30S ribosomal protein S8P
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_9_scaffold_2366_15
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14098..14253)
DNA (156bp) protein (52aa)
30S ribosomal protein S14 type Z n=1 Tax=Halobacterium sp. DL1 RepID=G4IGK8_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacteriu
rps14P; 30S ribosomal protein S14
qs_9_scaffold_2366_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14250..14777)
DNA (528bp) protein (176aa)
50S ribosomal protein L5 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL5_NATPD
rpl5p; 50S ribosomal protein L5P
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_9_scaffold_2366_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14774..15475)
DNA (702bp) protein (234aa)
30S ribosomal protein S4e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS4E_NATPD
rps4R; 30S ribosomal protein S4e
30S ribosomal protein S4e {ECO:0000255|HAMAP-Rule:MF_00485}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_9_scaffold_2366_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15472..15828)
DNA (357bp) protein (119aa)
50S ribosomal protein L24P n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP64_NATM8
rpl24; 50S ribosomal protein L24
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
qs_9_scaffold_2366_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15825..16124)
DNA (300bp) protein (100aa)
50S ribosomal protein L14 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL14_NATPD
rpl14p; 50S ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_9_scaffold_2366_20

Not on your lists


comp(16136..16516)
DNA (381bp) protein (127aa)
30S ribosomal protein S17P n=1 Tax=halophilic archaeon DL31 RepID=G2MM79_9ARCH
30S ribosomal protein S17
Ribosomal protein S17P {ECO:0000313|EMBL:AEN06126.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_9_scaffold_2366_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16507..17841)
DNA (1335bp) protein (445aa)
30S ribosomal protein S3 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP70_NATM8
rps3; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapen
qs_9_scaffold_2366_22
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(17841..18302)
DNA (462bp) protein (154aa)
50S ribosomal protein L22P n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MQL2_9EURY
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" s
qs_9_scaffold_2366_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(18302..18724)
DNA (423bp) protein (141aa)
30S ribosomal protein S19 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS19_NATPD
rps19p; 30S ribosomal protein S19P
30S ribosomal protein S19 {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_9_scaffold_2366_24
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(18717..19451)
DNA (735bp) protein (245aa)
50S ribosomal protein L2 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LL38_HALJP
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
rpl2p; 50S ribosomal protein L2P
qs_9_scaffold_2366_25
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(19454..19702)
DNA (249bp) protein (83aa)
50S ribosomal protein L23P n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BDP1_9EURY
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56
50S ribosomal protein L23
qs_9_scaffold_2366_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(19699..20445)
DNA (747bp) protein (249aa)
50S ribosomal protein L4 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HFN4_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus H
rpl4lp; 50S ribosomal protein L4P
qs_9_scaffold_2366_27
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(20445..21419)
DNA (975bp) protein (325aa)
50S ribosomal protein L3 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL3_NATPD
rpl3p; 50S ribosomal protein L3P
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_9_scaffold_2366_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21460..22005)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMY9_NATPD
rpl operon protein
DUF171 family protein {ECO:0000313|EMBL:CAI50517.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
Displaying 28 items

View Taxonomy