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qs_9_scaffold_542

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_542_1
unknown

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2..94
DNA (93bp) protein (31aa)

This feature has no annotations

qs_9_scaffold_542_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(86..583)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GUS8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88881.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_542_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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844..1743
DNA (900bp) protein (300aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1210908 specie
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Halogranum salarium B-1 RepID=J3JGU8_9EURY
qs_9_scaffold_542_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1740..2525
DNA (786bp) protein (262aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102};; TaxID=1227456 spe
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAM4_9EURY
qs_9_scaffold_542_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2522..3358
DNA (837bp) protein (279aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CAI48838.1}; EC=2.3.1.117 {ECO:0000313|EMBL:CAI48838.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteri
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISP8_NATPD
qs_9_scaffold_542_6
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3456..4682
DNA (1227bp) protein (409aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0GYJ1_9EURY
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
qs_9_scaffold_542_7
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4679..5542
DNA (864bp) protein (288aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000313|EMBL:ELZ85704.1}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1
Diaminopimelate epimerase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HRF9_9EURY
diaminopimelate epimerase
qs_9_scaffold_542_8
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5535..6617
DNA (1083bp) protein (361aa)
Peptidase M20-M25-M40 superfamily protein (EC:3.4.-.-) rbh
Succinyl-diaminopimelate desuccinylase n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0GP73_HALL2
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:ELZ73383.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lucente
qs_9_scaffold_542_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6665..7171
DNA (507bp) protein (169aa)
PUA domain containing protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZI74_9EURY
PUA domain containing protein {ECO:0000313|EMBL:EJN60415.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
PUA domain containing protein
qs_9_scaffold_542_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7591..7968
DNA (378bp) protein (126aa)
Nascent polypeptide-associated complex protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSZ3_9EURY
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
Nascent polypeptide-associated complex protein
qs_9_scaffold_542_11
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7965..8702
DNA (738bp) protein (246aa)
Methyltransferase type 12 n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P180_9EURY
Methyltransferase type 12 {ECO:0000313|EMBL:EMA63841.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21
methyltransferase type 12
qs_9_scaffold_542_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8757..8999
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWK3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48213.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_9_scaffold_542_13
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8983..9360
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EL75_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ47858.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
qs_9_scaffold_542_14
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9353..9901)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KMS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA21449.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
qs_9_scaffold_542_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9938..10240)
DNA (303bp) protein (101aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
DNA-directed RNA polymerase subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTJ3_NATM8
tfs1; transcription elongation factor TFS
qs_9_scaffold_542_16

Not on your lists

10460..11476
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XTQ4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11959.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
qs_9_scaffold_542_17
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11573..12892
DNA (1320bp) protein (440aa)
Multidrug resistance protein-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQW9_HALAR
Multidrug resistance protein-like protein {ECO:0000313|EMBL:EMA23616.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
major facilitator superfamily protein
qs_9_scaffold_542_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13169..13936)
DNA (768bp) protein (256aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LYX5_9EURY
Enoyl-CoA hydratase {ECO:0000313|EMBL:EMA38782.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
qs_9_scaffold_542_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14027..14800
DNA (774bp) protein (258aa)
Carbamoyl phosphate synthase L chain n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR14_9EURY
Carbamoyl phosphate synthase L chain {ECO:0000313|EMBL:ELZ25666.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
carbamoyl-phosphate synthase L chain ATP-binding protein
qs_9_scaffold_542_20
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14800..15345
DNA (546bp) protein (182aa)
Conserved hypothetical membrane protein, SNARE-associated Golgi protein family n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNC7_9EURY
conserved hypothetical membrane protein, SNARE-associated Golgi protein family
Conserved hypothetical membrane protein, SNARE-associated Golgi protein family {ECO:0000313|EMBL:CCQ34601.1}; Membrane protein YqaA {ECO:0000313|EMBL:ERJ05078.1}; TaxID=1033806 species="Archaea; Eurya
Displaying 20 items

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