ggKbase home page

qs_9_scaffold_552

Search features with annotation key words

Displaying items 1-30 of 40 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_552_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

126..1034
DNA (909bp) protein (303aa)
degP; probable periplasmic serine protease (EC:3.4.21.-)
Probable periplasmic serine protease {ECO:0000313|EMBL:CCC39908.1}; EC=3.4.21.- {ECO:0000313|EMBL:CCC39908.1};; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
Probable periplasmic serine protease n=2 Tax=Haloquadratum walsbyi RepID=G0LKF0_HALWC
qs_9_scaffold_552_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1078..2001
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8G6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53868.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
iron ABC transporter substrate-binding protein
qs_9_scaffold_552_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2006..2407
DNA (402bp) protein (134aa)
JAMM domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUQ8_NATPD
hypothetical protein
Metalloprotease JAMM1, desampylating {ECO:0000313|EMBL:CAI48122.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
qs_9_scaffold_552_4
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2440..2724
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KBI1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA17210.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
qs_9_scaffold_552_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2721..3461)
DNA (741bp) protein (247aa)
SAMP-activating enzyme E1 {ECO:0000313|EMBL:CAI48117.1}; EC=2.7.7.- {ECO:0000313|EMBL:CAI48117.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
SAMP-activating enzyme E1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUR3_NATPD
moeB; molybdenum cofactor biosynthesis protein MoeB
qs_9_scaffold_552_6
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3656..4384
DNA (729bp) protein (243aa)
Bacteriorhodopsin n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WGU1_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ELY48735.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
bacteriorhodopsin
qs_9_scaffold_552_7
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4436..4795
DNA (360bp) protein (120aa)
Lycopene cyclase domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7E2_HALXS
lycopene cyclase domain-containing protein
Lycopene cyclase domain protein {ECO:0000313|EMBL:AEH37862.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (stra
qs_9_scaffold_552_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4813..5121
DNA (309bp) protein (103aa)
crtY; lycopene cyclase (EC:1.14.-.-)
Lycopene beta-cyclase {ECO:0000313|EMBL:CAI48417.1}; EC=5.5.1.19 {ECO:0000313|EMBL:CAI48417.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
Lycopene beta-cyclase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITW6_NATPD
qs_9_scaffold_552_9
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5118..6164
DNA (1047bp) protein (349aa)
Brp-like protein-like protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K487_9EURY
blh; brp-like protein
Brp-like protein {ECO:0000313|EMBL:EMA24076.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13557.;
qs_9_scaffold_552_10
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6166..6567)
DNA (402bp) protein (134aa)
msrB; peptide methionine sulfoxide reductase MsrB (R-form specific) (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A3Y0_9EURY
Peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:GAD52324.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiph
qs_9_scaffold_552_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7000..7173
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CI69_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ22338.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_9_scaffold_552_12
unknown

Not on your lists

7205..7402
DNA (198bp) protein (66aa)

This feature has no annotations

qs_9_scaffold_552_13
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7384..7998
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DXE1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ39458.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
qs_9_scaffold_552_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8095..8379)
DNA (285bp) protein (95aa)
Translation initiation factor 1A n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4X2_HALJB
translation initiation factor aIF-1A
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
qs_9_scaffold_552_15
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8547..9689)
DNA (1143bp) protein (381aa)
HNH endonuclease n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LY87_9EURY
HNH endonuclease {ECO:0000313|EMBL:EMA38532.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10879.;
putative restriction endonuclease
qs_9_scaffold_552_trna_2
unknown

Not on your lists

comp(9877..9951)
DNA (75bp)
transferRNA
qs_9_scaffold_552_trna_1
unknown

Not on your lists

comp(10011..10083)
DNA (73bp)
transferRNA
qs_9_scaffold_552_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10183..11541
DNA (1359bp) protein (453aa)
cca; tRNA CCA-pyrophosphorylase (EC:2.7.7.25 2.7.7.21)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUD0_NATPD
qs_9_scaffold_552_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11542..12546)
DNA (1005bp) protein (335aa)
HdaI-type histone deacetylase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKB2_NATM8
hda1; HdaI-type histone deacetylase
HdaI-type histone deacetylase {ECO:0000313|EMBL:CCQ35579.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
qs_9_scaffold_552_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12543..12983)
DNA (441bp) protein (147aa)
Archaeal histone n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUD2_NATPD
hstA; histone
Archaeal histone {ECO:0000313|EMBL:CAI48249.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain AT
qs_9_scaffold_552_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13290..13829)
DNA (540bp) protein (180aa)
UPF0218 protein C443_12281 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLJ4_HALAR
hypothetical protein
UPF0218 protein Hmuk_0726 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
qs_9_scaffold_552_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13829..14026)
DNA (198bp) protein (66aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM8_NATPD
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomo
qs_9_scaffold_552_21
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14026..14607)
DNA (582bp) protein (194aa)
DNA-directed RNA polymerase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUL7_HALUD
DNA-directed RNA polymerase subunit E'
DNA-directed RNA polymerase {ECO:0000313|EMBL:ACV12374.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (
qs_9_scaffold_552_22
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14607..14975)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJW8_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09427.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
putative RNA-binding protein
qs_9_scaffold_552_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14972..16183)
DNA (1212bp) protein (404aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=IF2G_NATPD
tif2g; translation initiation factor IF-2 subunit gamma
Translation initiation factor 2 subunit gamma {ECO:0000255|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000255|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000255|HAMAP-Rule:MF_00119}; TaxID=348780 species="Arch
qs_9_scaffold_552_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16466..17389
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93943.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_9_scaffold_552_25
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17695..18000
DNA (306bp) protein (102aa)
haloacid dehalogenase (EC:3.8.1.2)
Haloacid dehalogenase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G6N0_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:ELZ80739.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;"
qs_9_scaffold_552_26
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18258..18881
DNA (624bp) protein (208aa)
Sjogrens syndrome scleroderma autoantigen 1 protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQ74_9EURY
hypothetical protein
Sjogrens syndrome scleroderma autoantigen 1 protein {ECO:0000313|EMBL:ERJ05046.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ33086.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; H
qs_9_scaffold_552_27
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18878..21373)
DNA (2496bp) protein (832aa)
hef; ATP-dependent RNA helicase/nuclease Hef (EC:3.6.4.13)
Hef nuclease {ECO:0000313|EMBL:ESP87849.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrell
ercc4-like helicase; K10896 fanconi anemia group M protein id=24616218 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
qs_9_scaffold_552_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21583..22593
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A372_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59803.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
Displaying items 1-30 of 40 in total

View Taxonomy