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qs_9_scaffold_780

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_780_1
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3..131
DNA (129bp) protein (43aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Archaeosine biosynthesis pro
7-carboxy-7-deazaguanine synthase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PDL7_9EURY
radical SAM protein
qs_9_scaffold_780_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

128..808
DNA (681bp) protein (227aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Archaeosine biosyn
7-cyano-7-deazaguanine synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSL1_9EURY
exsB protein
qs_9_scaffold_780_3
unknown

Not on your lists

comp(845..1081)
DNA (237bp) protein (79aa)

This feature has no annotations

qs_9_scaffold_780_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1175..1906
DNA (732bp) protein (244aa)
Conserved hypothetical membrane protein, putative permease (DUF1405) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PHT7_9EURY
conserved hypothetical membrane protein, putative permease (DUF1405)
Conserved hypothetical membrane protein, putative permease (DUF1405) {ECO:0000313|EMBL:CCQ32367.1}; Uncharacterized protein {ECO:0000313|EMBL:ERJ06931.1}; TaxID=1033806 species="Archaea; Euryarchaeota
qs_9_scaffold_780_5
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2010..3107)
DNA (1098bp) protein (366aa)
ATP-grasp protein-like protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IAC7_9EURY
Carboxylate-amine ligase {ECO:0000313|EMBL:AHG02793.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
ATP-grasp family protein
qs_9_scaffold_780_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3383..4465)
DNA (1083bp) protein (361aa)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Halogranum salarium B-1 RepID=J3A6R2_9EURY
DNA topoisomerase VI, subunit A
qs_9_scaffold_780_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4467..6860)
DNA (2394bp) protein (798aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000255|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000255|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000255|HAMAP-Rule:MF_00322}; Short=
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TOP6B_NATPD
qs_9_scaffold_780_8

Not on your lists

6957..8987
DNA (2031bp) protein (677aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase {ECO:0000313|EMBL:AEN05007.1}; EC=3.4.21.26 {ECO:0000313|EMBL:AEN05007.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Prolyl oligopeptidase n=1 Tax=halophilic archaeon DL31 RepID=G2MIS5_9ARCH
qs_9_scaffold_780_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9065..10978
DNA (1914bp) protein (638aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=348780 species="Archaea; Eur
DNA gyrase subunit B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPV8_NATPD
gyrB; DNA topoisomerase II subunit B (DNA gyrase)
qs_9_scaffold_780_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10975..12552
DNA (1578bp) protein (526aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
DNA gyrase subunit A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPV7_NATPD
gyrA; DNA gyrase subunit A
qs_9_scaffold_780_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12549..13538
DNA (990bp) protein (330aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
DNA gyrase subunit A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPV7_NATPD
Suspect SCG annotation. See neighboring gene [qs_9_scaffold_780_10].
gyrA; DNA gyrase subunit A
qs_9_scaffold_780_12
unknown

Not on your lists

comp(13540..13824)
DNA (285bp) protein (95aa)

This feature has no annotations

qs_9_scaffold_780_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13902..14801)
DNA (900bp) protein (300aa)
arg1; arginase (EC:3.5.3.1)
Arginase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMR3_9EURY
Arginase {ECO:0000313|EMBL:ELZ24535.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
qs_9_scaffold_780_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14910..15821)
DNA (912bp) protein (304aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUH9_HALBP
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ADQ68699.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" s
qs_9_scaffold_780_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15917..16456
DNA (540bp) protein (180aa)
Transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPK4_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ24538.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
hypothetical protein
qs_9_scaffold_780_16
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16505..17590
DNA (1086bp) protein (362aa)
NADH dehydrogenase n=2 Tax=Haloarcula RepID=M0KPU9_HALAR
NADH dehydrogenase {ECO:0000313|EMBL:EMA23372.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 122
NADH dehydrogenase
qs_9_scaffold_780_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17864..18673)
DNA (810bp) protein (270aa)
Uridine phosphorylase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HLC5_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ESP88729.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
purine or other phosphorylase family 1
qs_9_scaffold_780_18
unknown

Not on your lists

18748..19140
DNA (393bp) protein (131aa)

This feature has no annotations

qs_9_scaffold_780_19
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19141..19533)
DNA (393bp) protein (131aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H1W8_9EURY
Cytidine deaminase {ECO:0000313|EMBL:ELZ77767.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;"
qs_9_scaffold_780_20
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19571..20662)
DNA (1092bp) protein (364aa)
Ribose ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K663_9EURY
rbsC; ribose ABC transporter permease
Ribose ABC transporter permease {ECO:0000313|EMBL:EMA16872.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californi
qs_9_scaffold_780_21
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20655..21947)
DNA (1293bp) protein (431aa)
Ribose/branched-chain amino acids ABC transporter permease n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EG74_9EURY
Ribose/branched-chain amino acids ABC transporter permease {ECO:0000313|EMBL:ELZ46765.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
ABC-type transport system permease protein (probable substrate sugar)
qs_9_scaffold_780_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21944..23500)
DNA (1557bp) protein (519aa)
Putative sugar ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CTU7_9EURY
Putative sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ26063.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
nucleoside ABC transporter ATP-binding protein
qs_9_scaffold_780_23
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23505..24656)
DNA (1152bp) protein (384aa)
ABC-type transport system, substrate-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EI58_9EURY
ABC-type transport system, substrate-binding protein {ECO:0000313|EMBL:ELZ46763.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
rbsB; ABC-type transport system, substrate-binding protein
qs_9_scaffold_780_24
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24731..26092)
DNA (1362bp) protein (454aa)
Phosphomannomutase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMY7_HALBP
phosphomannomutase
Phosphomannomutase {ECO:0000313|EMBL:ADQ67399.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (str
qs_9_scaffold_780_25
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26366..26815)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YVW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY78274.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
qs_9_scaffold_780_26
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26925..27428
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JXT3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA13258.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
qs_9_scaffold_780_27
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27440..31048)
DNA (3609bp) protein (1203aa)
Type II secretion system protein E n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VZA6_9EURY
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AGN02610.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. H
qs_9_scaffold_780_28
unknown

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comp(31141..31428)
DNA (288bp) protein (96aa)

This feature has no annotations

qs_9_scaffold_780_29
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31541..32212
DNA (672bp) protein (224aa)
Methyltransferase type 11 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4X4_HALJB
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADJ15591.1}; Type 11 methyltransferase {ECO:0000313|EMBL:ELY36331.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
qs_9_scaffold_780_trna_1
unknown

Not on your lists

32246..32316
DNA (71bp)
transferRNA
Displaying items 1-30 of 47 in total

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