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qs_9_scaffold_1123

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1123_1
unknown

Not on your lists

comp(1..447)
DNA (447bp) protein (149aa)

This feature has no annotations

qs_9_scaffold_1123_2
unknown

Not on your lists

1306..1728
DNA (423bp) protein (141aa)

This feature has no annotations

qs_9_scaffold_1123_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2191..3174
DNA (984bp) protein (328aa)
galE2; nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2J6_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA52076.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
qs_9_scaffold_1123_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3553..4581
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8Q4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40790.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_9_scaffold_1123_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4778..5233
DNA (456bp) protein (152aa)
30S ribosomal protein S19e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4J6_9EURY
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
rps19R; 30S ribosomal protein S19e
qs_9_scaffold_1123_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5616..5981
DNA (366bp) protein (122aa)
DNA-binding protein C449_14252 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBJ3_9EURY
DNA-binding protein C449_14252 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
hypothetical protein
qs_9_scaffold_1123_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6116..6802
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0K3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39206.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_9_scaffold_1123_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6900..8180
DNA (1281bp) protein (427aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000313|EMBL:EMA37038.1};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LV72_9EURY
qs_9_scaffold_1123_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8185..9234
DNA (1050bp) protein (350aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=2 Tax=Halococcus hamelinensis RepID=M0M467_9EURY
tRNA pseudouridine synthase A
qs_9_scaffold_1123_10
unknown

Not on your lists

9640..9768
DNA (129bp) protein (43aa)

This feature has no annotations

qs_9_scaffold_1123_11
unknown

Not on your lists

comp(9857..10090)
DNA (234bp) protein (78aa)

This feature has no annotations

qs_9_scaffold_1123_12
unknown

Not on your lists

comp(10196..10309)
DNA (114bp) protein (38aa)

This feature has no annotations

qs_9_scaffold_1123_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10410..11840)
DNA (1431bp) protein (477aa)
Peptidase M28 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3R6_9EURY
Peptidase M28 {ECO:0000313|EMBL:EMA52188.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
peptidase M28
qs_9_scaffold_1123_14
unknown

Not on your lists

comp(11969..12376)
DNA (408bp) protein (136aa)

This feature has no annotations

qs_9_scaffold_1123_15
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12865..13149
DNA (285bp) protein (95aa)
50S ribosomal protein L44e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ADM3_9EURY
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
ribosomal protein L44E
qs_9_scaffold_1123_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13149..13343
DNA (195bp) protein (65aa)
30S ribosomal protein S27e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIB6_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
30S ribosomal protein S27
qs_9_scaffold_1123_17
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13429..14229
DNA (801bp) protein (267aa)
Translation initiation factor IF-2 subunit alpha n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M442_HALMO
Translation initiation factor IF-2 subunit alpha {ECO:0000313|EMBL:EMA40466.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor 2, alpha subunit (eIF-2alpha)
qs_9_scaffold_1123_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14520..15275
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR21_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25068.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
3-isopropylmalate dehydratase
qs_9_scaffold_1123_19
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15453..18230
DNA (2778bp) protein (926aa)
Serine protease protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2BB51_9PLAN
Serine protease protein {ECO:0000313|EMBL:EMB18888.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula eu
aprE; subtilisin-like serine protease
qs_9_scaffold_1123_20
unknown

Not on your lists

comp(18372..18440)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 20 items

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