ggKbase home page

qs_9_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_122_1
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..253
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R687_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG19967.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
qs_9_scaffold_122_2

Not on your lists

comp(341..844)
DNA (504bp) protein (168aa)
Cytosine/adenosine deaminase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XKJ1_9ARCH
Cytosine/adenosine deaminase {ECO:0000313|EMBL:ESS02473.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
CMP/dCMP deaminase zinc-binding protein
qs_9_scaffold_122_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1226..3538
DNA (2313bp) protein (771aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=931277 species="Archaea; E
metS; methionine--tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N2A8_HALMO
qs_9_scaffold_122_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3535..4005
DNA (471bp) protein (157aa)
Phosphatidylethanolamine-binding protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KUF9_HALAR
Phosphatidylethanolamine-binding protein {ECO:0000313|EMBL:EMA24533.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
pebP; phosphatidylethanolamine-binding protein
qs_9_scaffold_122_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4317..4619)
DNA (303bp) protein (101aa)
Major facilitator superfamily transporter n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LGA9_HALWC
major facilitator superfamily transporter
Major facilitator superfamily transport protein {ECO:0000313|EMBL:CAJ51257.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloq
qs_9_scaffold_122_6

Not on your lists

comp(4644..4775)
DNA (132bp) protein (44aa)
Nitrate/nitrite transporter n=1 Tax=uncultured archaeon A07HB70 RepID=V4XX23_9ARCH
Nitrate/nitrite transporter {ECO:0000313|EMBL:ESS06803.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
major facilitator superfamily transporter
qs_9_scaffold_122_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4776..5297)
DNA (522bp) protein (174aa)
Major facilitator superfamily transporter n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18DS6_HALWD
oxlT; major facilitator family oxalate/formate antiporter
Major facilitator superfamily transport protein {ECO:0000313|EMBL:CAJ51257.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloq
qs_9_scaffold_122_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5254..5601)
DNA (348bp) protein (116aa)
Arabinose efflux permease n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1N021_9EURY
major facilitator superfamily transporter
Arabinose efflux permease {ECO:0000313|EMBL:ERG96129.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07H
qs_9_scaffold_122_9
unknown

Not on your lists

5815..6003
DNA (189bp) protein (63aa)

This feature has no annotations

qs_9_scaffold_122_10
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6144..6926
DNA (783bp) protein (261aa)
Fructose-bisphosphate aldolase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AQ31_NATA1
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:ELZ00018.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain AT
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
qs_9_scaffold_122_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7219..8733
DNA (1515bp) protein (505aa)
Periplasmic copper-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3Q1_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EMA39254.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamel
hypothetical protein
qs_9_scaffold_122_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8877..10058
DNA (1182bp) protein (394aa)
phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CU06_9EURY
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:ELZ26735.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
qs_9_scaffold_122_13
unknown

Not on your lists

comp(11300..11665)
DNA (366bp) protein (122aa)

This feature has no annotations

qs_9_scaffold_122_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11964..12758
DNA (795bp) protein (265aa)
Protein GrpE n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR18_9EURY
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
grpE; heat shock protein GrpE
qs_9_scaffold_122_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12906..13211
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWZ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49843.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_9_scaffold_122_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13293..13718)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M7M9_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA40380.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_9_scaffold_122_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13974..14393)
DNA (420bp) protein (140aa)
GCN5-related N-acetyltransferase n=1 Tax=Halogranum salarium B-1 RepID=J3A498_9EURY
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EJN60263.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
AttT protein
qs_9_scaffold_122_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14581..15876
DNA (1296bp) protein (432aa)
Probable glycosyltransferase, type 2 {ECO:0000313|EMBL:CAI50702.1}; EC=2.4.-.- {ECO:0000313|EMBL:CAI50702.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
Probable glycosyltransferase, type 2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMF6_NATPD
glycosyltransferase-like protein
qs_9_scaffold_122_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16004..16582
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2U8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51858.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_9_scaffold_122_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16689..17288
DNA (600bp) protein (200aa)
Mut/nudix family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5J4_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA53192.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
nudF3; NUDIX family hydrolase
qs_9_scaffold_122_21
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17525..18340
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NXB6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA62572.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
qs_9_scaffold_122_22
unknown

Not on your lists

18500..18892
DNA (393bp) protein (131aa)

This feature has no annotations

qs_9_scaffold_122_23
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18944..20368)
DNA (1425bp) protein (475aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000256|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000256|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
3-dehydroquinate synthase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SZV2_NATMM
3-dehydroquinate synthase
qs_9_scaffold_122_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20475..21470)
DNA (996bp) protein (332aa)
Competence-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDA9_9EURY
Competence-like protein {ECO:0000313|EMBL:EMA55967.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_9_scaffold_122_25

Not on your lists

21770..22633
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4ZZ13_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS08300.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
qs_9_scaffold_122_26
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22712..24094)
DNA (1383bp) protein (461aa)
VWA containing CoxE family protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WJ54_GEOS8
CoxE
CoxE {ECO:0000313|EMBL:AJE03092.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
qs_9_scaffold_122_27
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24084..25085)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Gordonia aichiensis NBRC 108223 RepID=L7KSZ4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC50843.1}; TaxID=1220583 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis NBRC 108223.;"
ATPase
qs_9_scaffold_122_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25197..26090
DNA (894bp) protein (298aa)
3-oxoacyl-ACP reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2Z2_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EMA51045.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
qs_9_scaffold_122_29
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26065..26793
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PLR3_9EURY
DUF457 family protein
Uncharacterized protein {ECO:0000313|EMBL:ERG93176.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
qs_9_scaffold_122_30

Not on your lists

26946..27350
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y514_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07766.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
Displaying items 1-30 of 36 in total

View Taxonomy