ggKbase home page

qs_9_scaffold_1519

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1519_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..328
DNA (327bp) protein (109aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQN4_STRRD
extracellular solute-binding protein
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:ACZ86431.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="St
qs_9_scaffold_1519_2
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

328..1272
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00036E0AE0
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEG61347.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomacu
qs_9_scaffold_1519_3
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1265..2161
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00037F6579
binding-protein-dependent transport system inner membrane protein
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:ABE59959.1}; Flags: Precursor;; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; H
qs_9_scaffold_1519_4
unknown

Not on your lists

2388..2558
DNA (171bp) protein (57aa)

This feature has no annotations

qs_9_scaffold_1519_5
unknown

Not on your lists

comp(3199..3417)
DNA (219bp) protein (73aa)

This feature has no annotations

qs_9_scaffold_1519_6
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3990..4175
DNA (186bp) protein (62aa)
PTS system, galactitol-specific enzyme II, A component (EC:2.7.1.69)
PTS system, galactitol-specific enzyme II, A component n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G0B6_9EURY
PTS system, galactitol-specific enzyme II, A component {ECO:0000313|EMBL:ELZ65645.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
qs_9_scaffold_1519_7
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4185..4877)
DNA (693bp) protein (231aa)
L-fuculose phosphate aldolase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AMG6_9EURY
L-fuculose phosphate aldolase {ECO:0000313|EMBL:ELY98563.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077
ribulose-5-phosphate 4-epimerase-like epimerase or aldolase
qs_9_scaffold_1519_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5155..5520
DNA (366bp) protein (122aa)
rhaB; rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KDJ8_9EURY
Rhamnulokinase {ECO:0000313|EMBL:EMA18259.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13557.;"
qs_9_scaffold_1519_9
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6207..6530
DNA (324bp) protein (108aa)
rhaB; rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase {ECO:0000313|EMBL:AEM59274.1}; EC=2.7.1.5 {ECO:0000313|EMBL:AEM59274.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" so
Rhamnulokinase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KDJ8_9EURY
qs_9_scaffold_1519_10
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6612..7757)
DNA (1146bp) protein (382aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Carbohydrate ABC transporter ATP-binding protein, cut1 family n=1 Tax=Halogranum salarium B-1 RepID=J2ZJI5_9EURY
Carbohydrate ABC transporter ATP-binding protein, cut1 family {ECO:0000313|EMBL:EJN60880.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halog
qs_9_scaffold_1519_11
bacterium UASB270, Bacteria

Not on your lists

comp(7840..8679)
DNA (840bp) protein (280aa)
binding-protein-dependent transport systems inner membrane component n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625726
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAK57382.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
sugar ABC transporter permease
qs_9_scaffold_1519_12
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(8679..9620)
DNA (942bp) protein (314aa)
binding-protein-dependent transport systems inner membrane component n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625725
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=Caldatribacterium californiense
transmembrane transporter
qs_9_scaffold_1519_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9685..11325)
DNA (1641bp) protein (547aa)
putative extracellular solute-binding protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625729
Uncharacterized protein {ECO:0000313|EMBL:ETX09130.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative ABC-type sugar transport system, periplasmic component
qs_9_scaffold_1519_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11535..12236)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDC2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57364.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_9_scaffold_1519_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12654..13436
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYQ2_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27542.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
short-chain dehydrogenase
qs_9_scaffold_1519_16
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13765..15369
DNA (1605bp) protein (535aa)
Rhamnulokinase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L3Q1_HALJP
rhamnulokinase
Rhamnulokinase {ECO:0000313|EMBL:AJF27545.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_9_scaffold_1519_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15568..16065)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EUB2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57942.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
lactoylglutathione lyase family protein
qs_9_scaffold_1519_18
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16280..17281)
DNA (1002bp) protein (334aa)
Ketol-acid reductoisomerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA38_HALJB
ketol-acid reductoisomerase
Ketol-acid reductoisomerase {ECO:0000313|EMBL:ADJ14560.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeo
qs_9_scaffold_1519_19
unknown

Not on your lists

comp(18088..18438)
DNA (351bp) protein (117aa)

This feature has no annotations

qs_9_scaffold_1519_20
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18976..19962)
DNA (987bp) protein (329aa)
Nuclease n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WQ97_9EURY
Nuclease {ECO:0000313|EMBL:ELY50493.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795.;"
nuclease
Displaying 20 items

View Taxonomy