ggKbase home page

qs_9_scaffold_258

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_258_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

805..1266
DNA (462bp) protein (154aa)
Thioredoxin n=2 Tax=Haloarcula hispanica RepID=G0HZY3_HALHT
thioredoxin
Thioredoxin {ECO:0000313|EMBL:AEM59204.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC 33960
qs_9_scaffold_258_2
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1315..2712)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00037C5CB7
sub; peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AFK18712.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
qs_9_scaffold_258_3
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2933..3547
DNA (615bp) protein (205aa)
UspA domain-containing protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VYC3_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:ELY42179.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense
UspA domain-containing protein
qs_9_scaffold_258_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3568..4041)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MV45_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49607.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_9_scaffold_258_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4540..5031
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVN9_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46154.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_9_scaffold_258_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5331..5522)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49606.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qs_9_scaffold_258_7
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5876..6469
DNA (594bp) protein (198aa)
DNA-binding ferritin-like protein (Oxidative damage protectant) n=2 Tax=Halobacteriaceae RepID=L0JNS0_NATP1
DNA-binding ferritin-like protein (oxidative damage protectant)
Ferritin Dps family protein {ECO:0000313|EMBL:ELZ15039.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolera
qs_9_scaffold_258_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6717..6890)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ53_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45383.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_9_scaffold_258_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7091..7789)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSN3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92442.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_9_scaffold_258_10
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7933..8415)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZUJ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY89262.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
qs_9_scaffold_258_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8412..9569)
DNA (1158bp) protein (386aa)
3-ketoacyl-CoA thiolase (EC:2.3.1.176)
Acetyl-CoA acetyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYP6_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EMA50438.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
qs_9_scaffold_258_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10185..11327
DNA (1143bp) protein (381aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY00_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ELZ27488.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
qs_9_scaffold_258_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11504..11986
DNA (483bp) protein (161aa)
Thioesterase superfamily protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZW0_HALMD
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACV46868.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
qs_9_scaffold_258_14
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12046..12621)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SRY2_9EURY
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KKA37226.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
redoxin
qs_9_scaffold_258_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12827..13918
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9G2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42432.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_9_scaffold_258_16
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14157..15152)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B6K6_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELZ05284.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
qs_9_scaffold_258_17
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15304..16071)
DNA (768bp) protein (256aa)
PHP domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQZ4_HALTV
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:ADB62390.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATC
qs_9_scaffold_258_18
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16068..17060)
DNA (993bp) protein (331aa)
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8I9_9EURY
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase {ECO:0000313|EMBL:EMA16160.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
qs_9_scaffold_258_19
unknown

Not on your lists

comp(17434..18261)
DNA (828bp) protein (276aa)

This feature has no annotations

qs_9_scaffold_258_20
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19269..20447)
DNA (1179bp) protein (393aa)
Beta-carotene 15,15'-monooxygenase, Brp/Blh family protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CIG9_9EURY
Beta-carotene 15,15'-monooxygenase, Brp/Blh family protein {ECO:0000313|EMBL:ELZ23011.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" sou
beta-carotene 15,15'-monooxygenase (Brp)-like protein
qs_9_scaffold_258_21
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20444..21472)
DNA (1029bp) protein (343aa)
crtY; lycopene cyclase (EC:1.14.-.-)
Lycopene cyclase domain protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VME3_9EURY
Lycopene cyclase domain protein {ECO:0000313|EMBL:ELY38231.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetens
qs_9_scaffold_258_22
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22061..24010
DNA (1950bp) protein (650aa)
Bacterio-opsin activator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3G3_HALJB
bacterio-opsin activator
Bacterio-opsin activator {ECO:0000313|EMBL:ADJ15270.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
qs_9_scaffold_258_23
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24125..24604
DNA (480bp) protein (160aa)
Rhodopsin n=3 Tax=Haloarcula RepID=V5TJJ0_HALHI
rhodopsin
Rhodopsin {ECO:0000313|EMBL:AHB64865.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
Displaying 23 items

View Taxonomy