ggKbase home page

qs_9_scaffold_734

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_734_1

Not on your lists

100..1161
DNA (1062bp) protein (354aa)
Sugar ABC transporter integral membrane subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWF3_9EURY
Marine sediment metagenome DNA, contig: S01H1_L00139 {ECO:0000313|EMBL:GAF78977.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
qs_9_scaffold_734_2

Not on your lists

1592..2833
DNA (1242bp) protein (414aa)
Monosaccharide ABC transporter substrate-binding protein, cut2 family n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BWU3_9EURY
Marine sediment metagenome DNA, contig: S01H1_C00130 {ECO:0000313|EMBL:GAF72355.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
qs_9_scaffold_734_3

Not on your lists

3032..3790
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003819264
Marine sediment metagenome DNA, contig: S06H3_C00825 {ECO:0000313|EMBL:GAH90051.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ABC transporter ATP-binding protein
qs_9_scaffold_734_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3880..5793
DNA (1914bp) protein (638aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQZ7_9EURY
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:EMA48021.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
Chromosome segregation protein (Spc25, Csm1, Pcs1)
qs_9_scaffold_734_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6224..6991
DNA (768bp) protein (256aa)
IclR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXS6_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ28016.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
hypothetical protein
qs_9_scaffold_734_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7155..7325
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXS9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28021.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_9_scaffold_734_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7507..8598
DNA (1092bp) protein (364aa)
Gentisate 1,2-dioxygenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D044_9EURY
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:ELZ28022.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
phdI; gentisate 1,2-dioxygenase
qs_9_scaffold_734_8
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8941..9819)
DNA (879bp) protein (293aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9A6_9EURY
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KDE57665.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halosta
hypothetical protein
qs_9_scaffold_734_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9992..10387)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000382B366
hypothetical protein; K06893 Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
qs_9_scaffold_734_10
unknown

Not on your lists

comp(10714..11091)
DNA (378bp) protein (126aa)

This feature has no annotations

qs_9_scaffold_734_11
unknown

Not on your lists

11526..11711
DNA (186bp) protein (62aa)

This feature has no annotations

qs_9_scaffold_734_12
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11711..13063
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0003633EED
Uncharacterized protein {ECO:0000313|EMBL:KEO90021.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
Branched-chain acyl-CoA dehydrogenase
qs_9_scaffold_734_13
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13136..13480)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A870_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD53849.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
qs_9_scaffold_734_14
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13473..14792)
DNA (1320bp) protein (440aa)
Phenylacetate-coenzyme A ligase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YXS5_9EURY
Phenylacetate-coenzyme A ligase {ECO:0000313|EMBL:GAD53850.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
coenzyme F390 synthetase
qs_9_scaffold_734_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14812..16299)
DNA (1488bp) protein (496aa)
Aldehyde Dehydrogenase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUG9_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EFW92248.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilu
NAD-dependent aldehyde dehydrogenase
qs_9_scaffold_734_16
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17028..18257
DNA (1230bp) protein (410aa)
FAD-binding monooxygenase protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAU2_9EURY
FAD-binding monooxygenase protein {ECO:0000313|EMBL:ELZ31304.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
hypothetical protein
qs_9_scaffold_734_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18441..19331
DNA (891bp) protein (297aa)
ABC transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CY56_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ27377.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
ABC transporter
qs_9_scaffold_734_18
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19328..20020
DNA (693bp) protein (231aa)
ABC-type branched-chain amino acid transport system, ATPase component n=2 Tax=Haloferax RepID=M0HY90_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EMA07481.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofera
LivF; ABC-type branched-chain amino acid transport systems, ATPase component
qs_9_scaffold_734_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20245..21351)
DNA (1107bp) protein (369aa)
Putative high-affinity branched-chain amino acid ABC transporter permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZQ9_9EURY
Putative high-affinity branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELZ27379.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
branched-chain amino acid ABC transporter permease
qs_9_scaffold_734_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21348..22211)
DNA (864bp) protein (288aa)
Branched chain amino acid ABC transporter inner membrane protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVY8_9EURY
Branched chain amino acid ABC transporter inner membrane protein {ECO:0000313|EMBL:ELZ27380.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometri
branched-chain amino acid ABC transporter permease
qs_9_scaffold_734_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22398..23681)
DNA (1284bp) protein (428aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVV8_9EURY
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ27381.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeome
branched-chain amino acid ABC transporter substrate-binding protein
qs_9_scaffold_734_22
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24047..24973
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X4H7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56605.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
qs_9_scaffold_734_23
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25002..25262
DNA (261bp) protein (87aa)
MaoC domain protein dehydratase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVZ5_9EURY
MaoC domain protein dehydratase {ECO:0000313|EMBL:ELZ27385.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pa
maoC3; MaoC family protein
qs_9_scaffold_734_24
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25350..27008
DNA (1659bp) protein (553aa)
AMP-dependent synthetase and ligase n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JB34_HALJB
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADJ16487.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalico
qs_9_scaffold_734_25
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27097..27381)
DNA (285bp) protein (95aa)
Ferredoxin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5B7_9EURY
Ferredoxin {ECO:0000313|EMBL:ELZ29364.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
ferredoxin
qs_9_scaffold_734_26
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27384..27866)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SU69_9EURY
GCN5 family acetyltransferase
GCN5 family acetyltransferase {ECO:0000313|EMBL:KDE57390.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.
Displaying 26 items

View Taxonomy