ggKbase home page

qs_9_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 60 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_366_1
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..931)
DNA (930bp) protein (310aa)
Proteasome-activating nucleotidase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W0N1_9EURY
proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
qs_9_scaffold_366_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1017..2807)
DNA (1791bp) protein (597aa)
Oligoendopeptidase F n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QP86_9EURY
Oligoendopeptidase F {ECO:0000313|EMBL:EFW94002.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
oligoendopeptidase F
qs_9_scaffold_366_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2885..4207
DNA (1323bp) protein (441aa)
Aminopeptidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DH33_9EURY
Aminopeptidase {ECO:0000313|EMBL:ELZ34002.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
peptidase M28
qs_9_scaffold_366_4
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4204..4998)
DNA (795bp) protein (265aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JFK7_NATP1
pseudouridylate synthase
qs_9_scaffold_366_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4998..5444)
DNA (447bp) protein (149aa)
hypothetical protein id=24616035 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88006.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_366_6
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6156..7514)
DNA (1359bp) protein (453aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000313|EMBL:ELZ18187.1};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C753_9EURY
qs_9_scaffold_366_7
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7582..8175)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LI60_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA33312.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
qs_9_scaffold_366_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8177..8530)
DNA (354bp) protein (118aa)
DNA-binding protein C449_14252 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBJ3_9EURY
DNA-binding protein C449_14252 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
hypothetical protein
qs_9_scaffold_366_9
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8670..8927)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R741_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK20051.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
qs_9_scaffold_366_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8967..9176)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7S5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40664.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_9_scaffold_366_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9876..10193
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0LUH2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35750.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_9_scaffold_366_12
unknown

Not on your lists

10193..10297
DNA (105bp) protein (35aa)

This feature has no annotations

qs_9_scaffold_366_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10405..11772
DNA (1368bp) protein (456aa)
putative PQQ-dependent glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ41_9EURY
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ELZ27159.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
qs_9_scaffold_366_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12300..12563
DNA (264bp) protein (88aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEQ3_9EURY
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EMA43818.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
UDP-N-acetylglucosamine 2-epimerase
qs_9_scaffold_366_trna_1
unknown

Not on your lists

comp(13001..13074)
DNA (74bp)
transferRNA
qs_9_scaffold_366_15
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13159..13668)
DNA (510bp) protein (170aa)
Phage T7 F exclusion suppressor FxsA n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BQA9_9EURY
Phage T7 F exclusion suppressor FxsA {ECO:0000313|EMBL:ELZ11844.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena the
protein affecting phage T7 exclusion by the F plasmid
qs_9_scaffold_366_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13799..15445
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFN0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59366.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_9_scaffold_366_17
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15507..16310
DNA (804bp) protein (268aa)
Putative transcriptional regulator n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JQ01_NATP1
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGB33284.1}; Transcriptional regulator, TrmB {ECO:0000313|EMBL:ELY71651.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbale
qs_9_scaffold_366_18
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16550..17494)
DNA (945bp) protein (315aa)
GTP cyclohydrolase MptA {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.39 {ECO:0000256|HAMAP-Rule:MF_01527};; GTP cyclohydrolase IV {ECO:0000256|HAMAP-Rule:MF_01527}; TaxID=662477 species="Archaea; Eurya
GTP cyclohydrolase MptA n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYL2_HALVA
GTP cyclohydrolase
qs_9_scaffold_366_19
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17579..18403)
DNA (825bp) protein (275aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=795797 species="Archaea; Euryarchaeota;
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J830_HALJB
hypothetical protein
qs_9_scaffold_366_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19400..19633
DNA (234bp) protein (78aa)
Reca-superfamily ATPase possibly involved in signal transduction n=1 Tax=Halogranum salarium B-1 RepID=J3EWQ8_9EURY
Reca-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:EJN59372.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Ha
circadian clock protein KaiC
qs_9_scaffold_366_21
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20050..21999)
DNA (1950bp) protein (650aa)
ATPase-like protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YAD4_9EURY
ATPase-like protein {ECO:0000313|EMBL:ELY70995.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
qs_9_scaffold_366_22
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22139..22483
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BW38_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ15236.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qs_9_scaffold_366_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23035..24144)
DNA (1110bp) protein (370aa)
Nura domain-containing protein n=1 Tax=Halogranum salarium B-1 RepID=J3EVU3_9EURY
Nura domain-containing protein {ECO:0000313|EMBL:EJN58822.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
nura domain-containing protein
qs_9_scaffold_366_24
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24212..25282)
DNA (1071bp) protein (357aa)
Ribose ABC transporter permease n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KXF8_9EURY
Ribose ABC transporter permease {ECO:0000313|EMBL:EMA25966.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyt
rbsC; ribose ABC transporter permease rbh
qs_9_scaffold_366_25
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25275..26522)
DNA (1248bp) protein (416aa)
Sugar ABC transporter permease n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LKT8_HALJP
Sugar ABC transporter permease {ECO:0000313|EMBL:EMA34146.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
rbsC-4; sugar ABC transporter permease
qs_9_scaffold_366_26
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26519..27580)
DNA (1062bp) protein (354aa)
rbsA1; ribose ABC transporter ATP-binding protein RbsA (EC:3.6.3.17)
Ribose ABC transporter ATP-binding protein RbsA n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KKY4_HALAR
Ribose ABC transporter ATP-binding protein RbsA {ECO:0000313|EMBL:EMA20844.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
qs_9_scaffold_366_27
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28108..29169)
DNA (1062bp) protein (354aa)
ABC transporter n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J7Q2_HALVA
ABC transporter
ABC transporter {ECO:0000313|EMBL:AJF25620.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_9_scaffold_366_28
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29446..31056
DNA (1611bp) protein (537aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AIW3_NATA1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HA
phosphoglycerate mutase
qs_9_scaffold_366_29
unknown

Not on your lists

comp(31057..31182)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying items 1-30 of 60 in total

View Taxonomy