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qs_9_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 177 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_56_1
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..107
DNA (105bp) protein (35aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" so
qs_9_scaffold_56_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(626..1660)
DNA (1035bp) protein (345aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EMA46134.1}; EC=1.2.1.11 {ECO:0000313|EMBL:EMA46134.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
Aspartate-semialdehyde dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN17_9EURY
aspartate-semialdehyde dehydrogenase
qs_9_scaffold_56_3
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1860..2051)
DNA (192bp) protein (64aa)
30S ribosomal protein S17e n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0L818_9EURY
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" so
ribosomal protein S17E
qs_9_scaffold_56_4
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2076..2669)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAS1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14793.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_9_scaffold_56_5
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2666..3505)
DNA (840bp) protein (280aa)
Triphosphoribosyl-dephospho-CoA protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0B9F1_9EURY
Triphosphoribosyl-dephospho-CoA protein {ECO:0000313|EMBL:ELZ07107.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
Triphosphoribosyl-dephospho-CoA synthetase
qs_9_scaffold_56_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3532..4281)
DNA (750bp) protein (250aa)
tRNA-dihydrouridine synthase-like protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D341_HALXS
tRNA-dihydrouridine synthase-like protein
tRNA-dihydrouridine synthase-like protein {ECO:0000313|EMBL:AEH37326.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanadue
qs_9_scaffold_56_7
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4281..5288)
DNA (1008bp) protein (336aa)
2-phospho-L-lactate transferase {ECO:0000256|HAMAP-Rule:MF_01257}; EC=2.7.8.28 {ECO:0000256|HAMAP-Rule:MF_01257};; LPPG:FO 2-phospho-L-lactate transferase {ECO:0000256|HAMAP-Rule:MF_01257}; TaxID=1227
2-phospho-L-lactate transferase n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZKE6_9EURY
LPPG domain protein containing protein
qs_9_scaffold_56_8
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5339..6910)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D339_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH37324.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qs_9_scaffold_56_9
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7091..8794
DNA (1704bp) protein (568aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase (EC:6.5.1.1)
DNA ligase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XQA5_9EURY
qs_9_scaffold_56_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8831..10516
DNA (1686bp) protein (562aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUS1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91728.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_9_scaffold_56_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10568..11578
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PDY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH08284.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_9_scaffold_56_12
unknown

Not on your lists

comp(11678..11776)
DNA (99bp) protein (33aa)

This feature has no annotations

qs_9_scaffold_56_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12034..13449)
DNA (1416bp) protein (472aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3) rbh
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J636_HALJB
qs_9_scaffold_56_14
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13439..15877)
DNA (2439bp) protein (813aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
DNA topoisomerase VI subunit beta (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SZ90_NATMM
qs_9_scaffold_56_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16184..18145
DNA (1962bp) protein (654aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=485914 species="Archaea; Eur
DNA gyrase subunit beta (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Halomicrobium katesii RepID=UPI00037105BC
qs_9_scaffold_56_16
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18147..20600
DNA (2454bp) protein (818aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:ELY66881.1}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natria
DNA gyrase subunit A n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XZL3_9EURY
DNA gyrase, A subunit
qs_9_scaffold_56_17
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20670..21449
DNA (780bp) protein (260aa)
Metallophosphoesterase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8Q2_HALXS
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEH36811.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18
qs_9_scaffold_56_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21278..22198)
DNA (921bp) protein (307aa)
Arginase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUS9_9EURY
Arginase {ECO:0000313|EMBL:EFW91736.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
arginase
qs_9_scaffold_56_19
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22271..23182)
DNA (912bp) protein (304aa)
nucleoside-diphosphate-sugar epimerase id=24613403 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
UDP-glucose 4-epimerase {ECO:0000313|EMBL:GAD53549.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
nucleoside-diphosphate-sugar epimerase
qs_9_scaffold_56_20
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23359..23892
DNA (534bp) protein (178aa)
Transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4Y0_HALJB
hypothetical protein rbh
Transcriptional regulator {ECO:0000313|EMBL:ELY36325.1}; Uncharacterized protein {ECO:0000313|EMBL:ADJ15597.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
qs_9_scaffold_56_21
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24019..25173
DNA (1155bp) protein (385aa)
NADH dehydrogenase, FAD-containing subunit n=1 Tax=Natronococcus occultus SP4 RepID=L0K3N8_9EURY
NADH dehydrogenase, FAD-containing subunit
NADH dehydrogenase, FAD-containing subunit {ECO:0000313|EMBL:AGB39170.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcu
qs_9_scaffold_56_22
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25439..26260)
DNA (822bp) protein (274aa)
Uridine phosphorylase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GDX3_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ELZ70410.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;"
purine or other phosphorylase 1
qs_9_scaffold_56_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26310..26675)
DNA (366bp) protein (122aa)
TrmB family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INZ9_NATPD
transcription regulator
TrmB family transcription regulator {ECO:0000313|EMBL:CAI50153.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas p
qs_9_scaffold_56_24
unknown

Not on your lists

27189..27551
DNA (363bp) protein (121aa)

This feature has no annotations

qs_9_scaffold_56_trna_4
unknown

Not on your lists

comp(27825..27895)
DNA (71bp)
transferRNA
qs_9_scaffold_56_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28090..29112)
DNA (1023bp) protein (341aa)
trxB; thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDL8_9EURY
Thioredoxin reductase {ECO:0000313|EMBL:EMA43836.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
qs_9_scaffold_56_26
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29205..29846)
DNA (642bp) protein (214aa)
Methyltransferase type 11 n=1 Tax=Halobacterium sp. DL1 RepID=G4IF23_9EURY
S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:AHG03638.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="
methylase involved in ubiquinone/menaquinone biosynthesis
qs_9_scaffold_56_27
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29871..31994)
DNA (2124bp) protein (708aa)
Archaeal flagella assembly protein J n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WAA4_9EURY
archaeal flagella assembly protein J rbh
Archaeal flagella assembly protein J {ECO:0000313|EMBL:AGN02609.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
qs_9_scaffold_56_28
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31994..33679)
DNA (1686bp) protein (562aa)
Type II secretion system protein E n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VZA6_9EURY
type II secretion system protein E rbh
Type II secretion system protein E {ECO:0000313|EMBL:AGN02610.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. H
qs_9_scaffold_56_29

Not on your lists

comp(33762..34367)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y863_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07232.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
Displaying items 1-30 of 177 in total

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