ggKbase home page

qs_9_scaffold_661

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_661_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..381
DNA (381bp) protein (127aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4T6_9EURY
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:ELZ29184.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
tatC1; Sec-independent protein translocase protein TatC
qs_9_scaffold_661_2
unknown

Not on your lists

comp(481..780)
DNA (300bp) protein (100aa)

This feature has no annotations

qs_9_scaffold_661_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1038..1211
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3B8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29187.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_9_scaffold_661_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1204..1917
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2W3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29188.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_9_scaffold_661_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1984..2229
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2X5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29203.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_9_scaffold_661_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2231..3235)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3C7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29202.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_9_scaffold_661_7
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3380..5590
DNA (2211bp) protein (737aa)
von Willebrand factor type A domain-containing protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I5W9_9EURY
von Willebrand factor type A domain-containing protein {ECO:0000313|EMBL:ELZ91413.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Ha
hypothetical protein
qs_9_scaffold_661_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5728..6480)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUJ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91650.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_9_scaffold_661_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6477..8978)
DNA (2502bp) protein (834aa)
PKD domain containing protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0A2_9EURY
PKD domain containing protein {ECO:0000313|EMBL:EMA26976.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae
PKD domain containing protein
qs_9_scaffold_661_10
unknown

Not on your lists

comp(8975..9895)
DNA (921bp) protein (307aa)

This feature has no annotations

qs_9_scaffold_661_11
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9925..10530)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0A4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA26977.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
qs_9_scaffold_661_12
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10559..11014)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AT22_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELZ00504.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
qs_9_scaffold_661_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11297..12109)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D176_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29195.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
ArsR family transcriptional regulator
qs_9_scaffold_661_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12249..12665
DNA (417bp) protein (139aa)
receiver/sensor box histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4U2_9EURY
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELZ29194.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="H
qs_9_scaffold_661_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


12784..13845
DNA (1062bp) protein (354aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2W6_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=797114 species="Arch
translation initiation factor IF-2 subunit gamma
qs_9_scaffold_661_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13842..14222
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3C1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29192.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_9_scaffold_661_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14224..14802
DNA (579bp) protein (193aa)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ELZ29191.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ29191.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit E n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D105_9EURY
DNA-directed RNA polymerase subunit E'
qs_9_scaffold_661_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14802..14999
DNA (198bp) protein (66aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D171_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
qs_9_scaffold_661_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15001..15552
DNA (552bp) protein (184aa)
UPF0218 protein C475_03194 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4U0_9EURY
UPF0218 protein C475_03194 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
rpo operon protein
qs_9_scaffold_661_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15740..16246)
DNA (507bp) protein (169aa)
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase region n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2Z7_9EURY
Dihydrofolate reductase region {ECO:0000313|EMBL:ELZ29228.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
qs_9_scaffold_661_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16249..17247)
DNA (999bp) protein (333aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3F3_9EURY
Thymidylate synthase {ECO:0000313|EMBL:ELZ29227.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
qs_9_scaffold_661_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17326..18408)
DNA (1083bp) protein (361aa)
RNA methylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D138_9EURY
RNA methylase {ECO:0000313|EMBL:ELZ29226.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
RNA methylase
qs_9_scaffold_661_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18624..19184
DNA (561bp) protein (187aa)
TATA-box-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1A7_9EURY
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
TATA-box binding family protein
qs_9_scaffold_661_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19336..19776
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4W9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29224.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_9_scaffold_661_25
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19843..21468
DNA (1626bp) protein (542aa)
Gamma-glutamyltransferase n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DD70_9EURY
Gamma-glutamyltransferase {ECO:0000313|EMBL:ELZ32687.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 1024
gamma-glutamyltransferase 2
qs_9_scaffold_661_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21514..22362)
DNA (849bp) protein (283aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3E8_9EURY
qs_9_scaffold_661_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22573..23877
DNA (1305bp) protein (435aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4W5_9EURY
S-adenosylhomocysteine deaminase rbh
qs_9_scaffold_661_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24749..25027
DNA (279bp) protein (93aa)
Sulfur carrier protein ThiS n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY74_9EURY
Sulfur carrier protein ThiS {ECO:0000313|EMBL:ELZ28170.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
sulfur carrier protein ThiS
qs_9_scaffold_661_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(25269..28115)
DNA (2847bp) protein (949aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0G7_9EURY
Displaying 29 items

View Taxonomy