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QS_9_Eukaryota_52_13

QS_9_unknown_55_15
In projects: QS_9

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_9_UNK

Properties

Avg. coverage: 15.48 Longest contig: 230.46 Kbp Bin length: 11.28 Mbp GC content: 55.38 %
Contigs count: 327 Features count: 11017 rRNAs count: 2 tRNAs count: 44

Genome completeness

megabin RP 48 / 55 MC: 29 BSCG 44 / 51 MC: 24 ASCG 24 / 38 MC: 9
Displaying items 51-100 of 327 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_526 12 14935 bp 57.21 13.79 82.26
qs_9_scaffold_3296 5 4778 bp 51.63 13.79 62.66
qs_9_scaffold_3574
Order: Mamiellales (50%)
6 4525 bp 55.65 13.81 67.43
qs_9_scaffold_369 28 32919 bp 61.65 13.81 74.56
qs_9_scaffold_778 26 20076 bp 61.12 13.83 81.41
qs_9_scaffold_117 34 34502 bp 56.27 13.84 71.55
qs_9_scaffold_215 78 81721 bp 61.53 13.85 88.15
qs_9_scaffold_1585 12 7729 bp 56.84 13.88 78.76
qs_9_scaffold_1184 10 9274 bp 61.73 13.89 84.66
qs_9_scaffold_86 74 72687 bp 61.64 13.91 88.28
qs_9_scaffold_161 50 57273 bp 56.82 13.91 74.90
qs_9_scaffold_419 19 22955 bp 55.99 13.93 58.56
qs_9_scaffold_4222
Domain: Viridiplantae (50%)
8 7837 bp 61.73 13.95 85.36
qs_9_scaffold_314
Domain: Viridiplantae (57.14%)
14 20097 bp 55.19 13.96 72.19
qs_9_scaffold_630 17 13421 bp 55.09 13.98 57.25
qs_9_scaffold_3227 3 4843 bp 49.89 13.99 31.84
qs_9_scaffold_31 69 58948 bp 55.84 13.99 77.82
qs_9_scaffold_189 23 27097 bp 54.59 14.02 72.33
qs_9_scaffold_33 109 109580 bp 56.13 14.02 77.57
qs_9_scaffold_637 18 13349 bp 54.03 14.04 77.53
qs_9_scaffold_9387 4 3042 bp 47.40 14.07 47.73
qs_9_scaffold_2188 5 6244 bp 53.73 14.08 39.88
qs_9_scaffold_53 52 47936 bp 55.47 14.09 75.68
qs_9_scaffold_876
Domain: Viridiplantae (60%)
10 11097 bp 55.32 14.09 68.51
qs_9_scaffold_4983 4 6594 bp 59.40 14.10 88.03
qs_9_scaffold_1448 8 9270 bp 55.43 14.11 78.32
qs_9_scaffold_126 38 39832 bp 54.93 14.11 79.73
qs_9_scaffold_634 28 24048 bp 55.67 14.13 73.29
qs_9_scaffold_776
Domain: Viridiplantae (50%)
12 11891 bp 56.84 14.13 83.71
qs_9_scaffold_21 68 66099 bp 56.07 14.14 72.95
qs_9_scaffold_226 20 28048 bp 61.12 14.17 71.82
qs_9_scaffold_191
Domain: Viridiplantae (50%)
20 26004 bp 55.08 14.18 70.87
qs_9_scaffold_1022 7 10160 bp 55.39 14.22 77.48
qs_9_scaffold_291 24 21716 bp 53.86 14.22 60.73
qs_9_scaffold_1186 11 9266 bp 55.44 14.23 80.71
qs_9_scaffold_103
Domain: Viridiplantae (51.85%)
54 52694 bp 55.54 14.24 73.32
qs_9_scaffold_599 8 13820 bp 55.12 14.24 64.23
qs_9_scaffold_3267 5 4803 bp 61.88 14.24 78.01
qs_9_scaffold_336 32 43317 bp 56.47 14.25 77.87
qs_9_scaffold_44 208 201615 bp 55.05 14.25 77.75
qs_9_scaffold_46 77 62706 bp 55.51 14.27 75.67
qs_9_scaffold_352 69 65427 bp 61.92 14.28 85.47
qs_9_scaffold_13 144 144394 bp 54.84 14.29 78.97
qs_9_scaffold_414 29 17556 bp 54.44 14.29 81.85
qs_9_scaffold_197 27 25542 bp 58.02 14.30 85.81
qs_9_scaffold_156
Domain: Viridiplantae (50%)
28 29606 bp 55.89 14.30 75.85
qs_9_scaffold_359 32 36545 bp 55.85 14.31 78.54
qs_9_scaffold_82 42 41501 bp 55.70 14.31 76.85
qs_9_scaffold_271 36 38491 bp 55.82 14.31 74.63
qs_9_scaffold_339 41 43480 bp 56.13 14.32 75.96
Displaying items 51-100 of 327 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.