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QS_9_Eukaryota_52_13

QS_9_unknown_55_15
In projects: QS_9

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_9_UNK

Properties

Avg. coverage: 15.48 Longest contig: 230.46 Kbp Bin length: 11.28 Mbp GC content: 55.38 %
Contigs count: 327 Features count: 11017 rRNAs count: 2 tRNAs count: 44

Genome completeness

megabin RP 48 / 55 MC: 29 BSCG 44 / 51 MC: 24 ASCG 24 / 38 MC: 9
Displaying items 101-150 of 327 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_40 114 112160 bp 54.30 14.83 71.60
qs_9_scaffold_199 89 88051 bp 54.90 15.24 71.77
qs_9_scaffold_226 20 28048 bp 61.12 14.17 71.82
qs_9_scaffold_4036 8 4159 bp 59.99 27.22 72.06
qs_9_scaffold_314
Domain: Viridiplantae (57.14%)
14 20097 bp 55.19 13.96 72.19
qs_9_scaffold_129 52 50090 bp 55.12 14.65 72.21
qs_9_scaffold_37 79 102568 bp 55.52 14.57 72.27
qs_9_scaffold_189 23 27097 bp 54.59 14.02 72.33
qs_9_scaffold_1172 11 9361 bp 55.09 15.19 72.46
qs_9_scaffold_452 21 26805 bp 54.97 14.79 72.56
qs_9_scaffold_606 18 20781 bp 54.24 15.37 72.69
qs_9_scaffold_8 114 116063 bp 54.90 14.79 72.69
qs_9_scaffold_21 68 66099 bp 56.07 14.14 72.95
qs_9_scaffold_84 54 64817 bp 55.08 15.15 73.11
qs_9_scaffold_227 29 30969 bp 54.80 14.36 73.13
qs_9_scaffold_32 67 79720 bp 55.52 16.98 73.24
qs_9_scaffold_634 28 24048 bp 55.67 14.13 73.29
qs_9_scaffold_103
Domain: Viridiplantae (51.85%)
54 52694 bp 55.54 14.24 73.32
qs_9_scaffold_550
Phylum: Chlorophyta (52.63%)
19 24361 bp 56.61 14.58 73.33
qs_9_scaffold_102 37 36119 bp 55.41 14.94 73.37
qs_9_scaffold_105 90 86691 bp 55.04 14.92 73.44
qs_9_scaffold_1298 8 8752 bp 53.09 16.29 73.56
qs_9_scaffold_358
Domain: Viridiplantae (56.52%)
23 24935 bp 54.67 14.51 73.57
qs_9_scaffold_52 71 77271 bp 54.92 14.69 73.58
qs_9_scaffold_1146 16 9470 bp 50.98 14.53 73.59
qs_9_scaffold_23 87 77438 bp 56.01 14.61 73.68
qs_9_scaffold_168 34 30505 bp 59.70 13.20 73.70
qs_9_scaffold_63 98 109787 bp 55.83 14.45 73.78
qs_9_scaffold_249 39 44210 bp 55.56 14.53 73.82
qs_9_scaffold_417 23 30043 bp 56.26 14.38 73.86
qs_9_scaffold_57 67 75582 bp 54.75 14.71 73.88
qs_9_scaffold_299
Domain: Viridiplantae (56.25%)
16 20454 bp 55.81 14.74 74.13
qs_9_scaffold_1521
Domain: Viridiplantae (66.67%)
9 7912 bp 54.70 15.62 74.13
qs_9_scaffold_2394 15 10825 bp 56.08 13.55 74.19
qs_9_scaffold_80 36 49393 bp 54.31 14.71 74.22
qs_9_scaffold_221 27 27675 bp 55.10 14.51 74.30
qs_9_scaffold_26 145 129592 bp 55.16 14.47 74.33
qs_9_scaffold_92 55 59543 bp 56.64 14.37 74.47
qs_9_scaffold_10 103 129091 bp 55.07 14.73 74.51
qs_9_scaffold_89 37 38551 bp 55.42 14.85 74.55
qs_9_scaffold_369 28 32919 bp 61.65 13.81 74.56
qs_9_scaffold_271 36 38491 bp 55.82 14.31 74.63
qs_9_scaffold_257 36 45506 bp 55.69 14.39 74.67
qs_9_scaffold_3887 4 4269 bp 55.17 12.14 74.70
qs_9_scaffold_302 16 20435 bp 53.87 15.52 74.71
qs_9_scaffold_175 89 74327 bp 55.41 14.59 74.76
qs_9_scaffold_30 61 64054 bp 54.21 14.91 74.82
qs_9_scaffold_438 52 39457 bp 56.10 13.64 74.86
qs_9_scaffold_161 50 57273 bp 56.82 13.91 74.90
qs_9_scaffold_19143
Species: Gaeumannomyces graminis (50%)
2 1087 bp 54.37 9.94 75.07
Displaying items 101-150 of 327 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.