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QS_9_Eukaryota_52_13

QS_9_unknown_55_15
In projects: QS_9

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_9_UNK

Properties

Avg. coverage: 15.48 Longest contig: 230.46 Kbp Bin length: 11.28 Mbp GC content: 55.38 %
Contigs count: 327 Features count: 11017 rRNAs count: 2 tRNAs count: 44

Genome completeness

megabin RP 48 / 55 MC: 29 BSCG 44 / 51 MC: 24 ASCG 24 / 38 MC: 9
Displaying items 151-200 of 327 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_281
Domain: Viridiplantae (50%)
24 21128 bp 54.90 13.68 78.71
qs_9_scaffold_137 24 32158 bp 53.88 15.88 62.97
qs_9_scaffold_291 24 21716 bp 53.86 14.22 60.73
qs_9_scaffold_358
Domain: Viridiplantae (56.52%)
23 24935 bp 54.67 14.51 73.57
qs_9_scaffold_189 23 27097 bp 54.59 14.02 72.33
qs_9_scaffold_502 23 15895 bp 61.10 14.56 76.29
qs_9_scaffold_217 23 23607 bp 53.63 15.06 67.77
qs_9_scaffold_343 23 19534 bp 55.51 15.17 75.50
qs_9_scaffold_417 23 30043 bp 56.26 14.38 73.86
qs_9_scaffold_638 22 24392 bp 61.43 13.38 83.34
qs_9_scaffold_640 22 19530 bp 57.05 13.78 76.97
qs_9_scaffold_220 22 30178 bp 52.83 15.54 66.63
qs_9_scaffold_1135 21 15182 bp 50.18 14.79 75.23
qs_9_scaffold_1963 21 12665 bp 55.72 14.42 81.48
qs_9_scaffold_452 21 26805 bp 54.97 14.79 72.56
qs_9_scaffold_348 21 19261 bp 54.81 14.58 80.18
qs_9_scaffold_925 21 15808 bp 52.83 14.95 70.26
qs_9_scaffold_534 21 21401 bp 54.24 14.90 69.82
qs_9_scaffold_167 21 28696 bp 54.28 14.74 70.08
qs_9_scaffold_191
Domain: Viridiplantae (50%)
20 26004 bp 55.08 14.18 70.87
qs_9_scaffold_226 20 28048 bp 61.12 14.17 71.82
qs_9_scaffold_708 20 22452 bp 54.82 14.82 68.04
qs_9_scaffold_181 20 26710 bp 53.14 14.72 59.48
qs_9_scaffold_721 20 15217 bp 55.19 14.40 75.88
qs_9_scaffold_208 19 24379 bp 53.75 15.04 81.72
qs_9_scaffold_471 19 16100 bp 52.53 14.88 66.32
qs_9_scaffold_434 19 17761 bp 56.46 14.33 76.03
qs_9_scaffold_550
Phylum: Chlorophyta (52.63%)
19 24361 bp 56.61 14.58 73.33
qs_9_scaffold_1174 19 13594 bp 51.07 15.54 53.23
qs_9_scaffold_419 19 22955 bp 55.99 13.93 58.56
qs_9_scaffold_652 19 17717 bp 56.33 13.42 80.06
qs_9_scaffold_632 18 19161 bp 55.11 14.35 75.32
qs_9_scaffold_296 18 20630 bp 55.76 14.86 85.00
qs_9_scaffold_637 18 13349 bp 54.03 14.04 77.53
qs_9_scaffold_606 18 20781 bp 54.24 15.37 72.69
qs_9_scaffold_630 17 13421 bp 55.09 13.98 57.25
qs_9_scaffold_382 17 18469 bp 61.64 14.77 85.13
qs_9_scaffold_371 17 18791 bp 54.70 14.86 76.41
qs_9_scaffold_584 16 19951 bp 55.29 14.45 77.68
qs_9_scaffold_568
Phylum: Chlorophyta (50%)
16 14339 bp 61.99 13.68 92.66
qs_9_scaffold_384 16 21524 bp 53.66 14.66 52.25
qs_9_scaffold_299
Domain: Viridiplantae (56.25%)
16 20454 bp 55.81 14.74 74.13
qs_9_scaffold_388 16 21353 bp 53.43 15.40 52.71
qs_9_scaffold_302 16 20435 bp 53.87 15.52 74.71
qs_9_scaffold_1146 16 9470 bp 50.98 14.53 73.59
qs_9_scaffold_368
Domain: Viridiplantae (50%)
16 26276 bp 57.91 14.64 76.87
qs_9_scaffold_922 16 16218 bp 54.73 14.65 83.09
qs_9_scaffold_2394 15 10825 bp 56.08 13.55 74.19
qs_9_scaffold_2197 15 10213 bp 55.56 13.73 71.03
qs_9_scaffold_514 15 15171 bp 53.99 14.77 68.14
Displaying items 151-200 of 327 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.