ggKbase home page

QZM_D1_scaffold_64

Search features with annotation key words

Displaying items 31-60 of 178 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QZM_D1_scaffold_64_28

Not on your lists


31045..31641
DNA (597bp) protein (199aa)
50S ribosomal protein L3 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=RL3_CHLAD
50S ribosomal protein L3 {ECO:0000313|EMBL:KKS57196.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_35.;"
rplC; 50S ribosomal protein L3
QZM_D1_scaffold_64_29
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists


31638..32285
DNA (648bp) protein (216aa)
50S ribosomal protein L4, large subunit ribosomal protein L4 {ECO:0000313|EMBL:KKS18709.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L4
QZM_D1_scaffold_64_30
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists


32292..32687
DNA (396bp) protein (132aa)
50S ribosomal protein L23 Tax=Candidatus Phytoplasma solani RepID=U6E043_9MOLU
50S ribosomal protein L23 {ECO:0000313|EMBL:KKS18710.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
rplW; 50S ribosomal protein L23
QZM_D1_scaffold_64_31
unknown

Not on your lists

comp(32690..33457)
DNA (768bp) protein (256aa)

This feature has no annotations

QZM_D1_scaffold_64_32
unknown

Not on your lists

comp(33460..34119)
DNA (660bp) protein (220aa)

This feature has no annotations

QZM_D1_scaffold_64_33
unknown

Not on your lists

comp(34130..34795)
DNA (666bp) protein (222aa)

This feature has no annotations

QZM_D1_scaffold_64_34
R_OD1_Wolfebacteria_38_11, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

34906..36411
DNA (1506bp) protein (502aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037E6103
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_38_11_curated
QZM_D1_scaffold_64_35
GWC2_RIF_OD1_13_49_10_curated, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

36404..36967
DNA (564bp) protein (188aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037F7DD7
translation elongation factor P (EF-P)
Tax=GWC2_RIF_OD1_13_49_10_curated
QZM_D1_scaffold_64_36
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(36983..37957)
DNA (975bp) protein (325aa)
Tryptophan--tRNA ligase Tax=Clostridium sp. CAG:533 RepID=R6BIG5_9CLOT
Tryptophan-tRNA ligase {ECO:0000313|EMBL:KKS18815.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
tryptophanyl-tRNA synthetase
QZM_D1_scaffold_64_37
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(37954..39414)
DNA (1461bp) protein (487aa)
hypothetical protein Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI00037BC978
UDP-N-acetylmuramoylalanine-D-glutamate ligase {ECO:0000313|EMBL:KKS18819.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase
QZM_D1_scaffold_64_38
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

39446..39832
DNA (387bp) protein (129aa)
hypothetical protein bin=bin1_lowGC species=Cecembia lonarensis genus=Cecembia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
QZM_D1_scaffold_64_39
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists


comp(39838..40119)
DNA (282bp) protein (94aa)
50S ribosomal protein L27 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C2N9_THEGP
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium geofontis (strain OPF15).;"
QZM_D1_scaffold_64_40
RLO_OP11_Levybacteria_39_17, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(40153..40743)
DNA (591bp) protein (197aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
rnhB; ribonuclease HII
Tax=RIFCSPLOWO2_12_FULL_OP11_Levybacteria_39_17_curated
QZM_D1_scaffold_64_41
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

40797..43913
DNA (3117bp) protein (1039aa)
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000381959E
Polymerase III catalytic subunit, DnaE type protein {ECO:0000313|EMBL:KKQ67818.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
QZM_D1_scaffold_64_42
unknown

Not on your lists

43910..44470
DNA (561bp) protein (187aa)

This feature has no annotations

QZM_D1_scaffold_64_43
unknown

Not on your lists

comp(44428..44793)
DNA (366bp) protein (122aa)

This feature has no annotations

QZM_D1_scaffold_64_44
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(44786..45376)
DNA (591bp) protein (197aa)
Elongation factor Ts Tax=Thermotoga RepID=EFTS_THEP1
Elongation factor Ts {ECO:0000313|EMBL:KKS19020.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
tsf; elongation factor Ts
QZM_D1_scaffold_64_45
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists


comp(45373..46065)
DNA (693bp) protein (231aa)
30S ribosomal protein S2 Tax=Candidatus Actinomarina minuta RepID=S5DY63_9ACTN
30S ribosomal protein S2 {ECO:0000313|EMBL:KKS19021.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
rpsB; 30S ribosomal protein S2
QZM_D1_scaffold_64_46
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists


46142..46351
DNA (210bp) protein (70aa)
50S ribosomal protein L31 Tax=Mycoplasma sp. CAG:472 RepID=R7HEM7_9MOLU
50S ribosomal protein L31 {ECO:0000313|EMBL:KKS19022.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
rpmE; 50S ribosomal protein L31
QZM_D1_scaffold_64_47
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

46380..47120
DNA (741bp) protein (247aa)
Peptide chain release factor 1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZI9_9AQUI bin=RAAC2_WWE3 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=RAAC2_WWE3 organism_group=WWE3
Peptide chain release factor 1 {ECO:0000313|EMBL:KKS19023.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
Peptide chain release factor 1
QZM_D1_scaffold_64_48
unknown

Not on your lists

47137..47262
DNA (126bp) protein (42aa)

This feature has no annotations

QZM_D1_scaffold_64_49

Not on your lists

47259..48176
DNA (918bp) protein (306aa)
Alkyl hydroperoxide reductase, F subunit {ECO:0000313|EMBL:KKR10447.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_39_18.;"
Alkyl hydroperoxide reductase, F subunit bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
QZM_D1_scaffold_64_50
GWA2_OD1_rel_E2_38_254_42_10, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(48165..49727)
DNA (1563bp) protein (521aa)
gpmI; phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000313|EMBL:KKS25387.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA2_42_10.;"
QZM_D1_scaffold_64_51
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

49876..51402
DNA (1527bp) protein (509aa)
tjr:TherJR_1279 metal dependent phosphohydrolase (EC:3.1.4.16); K06950 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Ribonuclease Y {ECO:0000313|EMBL:KKS18973.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
metal dependent phosphohydrolase
QZM_D1_scaffold_64_52
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

51471..51761
DNA (291bp) protein (97aa)
DNA-binding protein HU Tax=Solobacterium moorei F0204 RepID=E7MQI8_9FIRM
Histone-like protein prokaryotic DNA-binding protein {ECO:0000313|EMBL:KKS18972.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
DNA-binding protein HU
QZM_D1_scaffold_64_53
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

51993..52559
DNA (567bp) protein (189aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
deoxycytidine triphosphate deaminase Tax=unclassified candidate division EM 19 RepID=UPI00036C57AD
QZM_D1_scaffold_64_54
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

52758..53147
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3D4_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99771.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
QZM_D1_scaffold_64_55
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

53187..53606
DNA (420bp) protein (140aa)
PF03479 domain protein Tax=Bacteriovorax sp. BAL6_X RepID=T0CBE0_9DELT
hypothetical protein
Tax=RBG_16_Zixibacteria_40_9_curated
QZM_D1_scaffold_64_56
RHI_RIF_OD1_10_43_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

53606..54055
DNA (450bp) protein (150aa)
Putative uncharacterized protein bin=GWC2_TM7_48_9 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_43_12b_curated
QZM_D1_scaffold_64_57
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

54088..55032
DNA (945bp) protein (315aa)
Bifunctional phosphoglucose/phosphomannose isomerase bin=GWA1_ZB2_49_26 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
pgi; bifunctional phosphoglucose/phosphomannose isomerase
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
Displaying items 31-60 of 178 in total

View Taxonomy