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QZM_D1_scaffold_64

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Displaying items 61-90 of 178 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QZM_D1_scaffold_64_58
GWA1_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

55032..56195
DNA (1164bp) protein (388aa)
ROK family protein Tax=mine drainage metagenome RepID=T1BYV6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKQ80870.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_38_7.;"
ROK family protein
QZM_D1_scaffold_64_59
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

56241..56462
DNA (222bp) protein (74aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos26B2 RepID=Q64C65_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
QZM_D1_scaffold_64_60
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

56459..56779
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Firmicutes bacterium CAG:460 RepID=R7IFA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49232.1}; species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
hypothetical protein
QZM_D1_scaffold_64_trna_3
unknown

Not on your lists

56849..56920
DNA (72bp)
transferRNA Pro
QZM_D1_scaffold_64_61
R_OD1_Nomurabacteria_46_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

56944..57354
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZRZ9_9BACT
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_46_18_curated
QZM_D1_scaffold_64_62
GWC2_OD1_37_9_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

57694..58089
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ47340.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC2_37_9.;"
transmembrane_regions 7..25 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
QZM_D1_scaffold_64_63
R_OD1_Nomurabacteria_36_29, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

58125..58682
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1Y6T8_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_36_29_curated
QZM_D1_scaffold_64_64
R_OD1_40_30, Parcubacteria, Bacteria

Not on your lists

58685..59419
DNA (735bp) protein (245aa)
Cell wall lytic activity Tax=Bacillus methanolicus MGA3 RepID=I3E8I6_BACMT
NLP/P60 protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_40_30_curated
QZM_D1_scaffold_64_65
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

59568..60017
DNA (450bp) protein (150aa)
transmembrane_regions bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
QZM_D1_scaffold_64_66
unknown

Not on your lists

60213..60968
DNA (756bp) protein (252aa)

This feature has no annotations

QZM_D1_scaffold_64_67
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists

61145..61963
DNA (819bp) protein (273aa)
Ribosomal RNA small subunit methyltransferase I Tax=Aquifex aeolicus (strain VF5) RepID=O67195_AQUAE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
QZM_D1_scaffold_64_68
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(61982..62692)
DNA (711bp) protein (237aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase Tax=uncultured bacterium RepID=K1ZJF9_9BACT
Triosephosphate isomerase {ECO:0000313|EMBL:KKS18750.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
QZM_D1_scaffold_64_69
GWC1_OD1_42_11, Parcubacteria, Bacteria

Not on your lists

comp(62716..63396)
DNA (681bp) protein (227aa)
Ribosomal RNA small subunit methyltransferase E Tax=Clostridium sp. CAG:780 RepID=R5PWT3_9CLOT
Ribosomal RNA small subunit methyltransferase E {ECO:0000313|EMBL:KKS26817.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_42_11.;"
protein of unknown function DUF558
QZM_D1_scaffold_64_70
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63393..63971)
DNA (579bp) protein (193aa)
ComF family protein Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4L0N0_9FIRM
putative competence protein
Putative competence protein {ECO:0000313|EMBL:CDZ75525.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
QZM_D1_scaffold_64_71
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

64051..65124
DNA (1074bp) protein (358aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS18752.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
QZM_D1_scaffold_64_72
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

65144..65647
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS18753.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
QZM_D1_scaffold_64_73
unknown

Not on your lists

65644..66204
DNA (561bp) protein (187aa)

This feature has no annotations

QZM_D1_scaffold_64_74
unknown

Not on your lists

66201..66494
DNA (294bp) protein (98aa)

This feature has no annotations

QZM_D1_scaffold_64_75
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

66508..68226
DNA (1719bp) protein (573aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F273B
Type II secretion system protein E, type IV pilus assembly protein PilB {ECO:0000313|EMBL:KKS18756.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
type II secretion system protein E
QZM_D1_scaffold_64_76
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

68238..69299
DNA (1062bp) protein (354aa)
Twitching motility protein {ECO:0000313|EMBL:KKS18757.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
twitching motility protein; K02669 twitching motility protein PilT bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
twitching motility protein pilT
QZM_D1_scaffold_64_77
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

69315..70520
DNA (1206bp) protein (402aa)
Type II secretion system F domain protein {ECO:0000313|EMBL:KKS18758.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
Type II secretion system F domain protein bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
pilC; type 4 fimbrial assembly protein PilC
QZM_D1_scaffold_64_78
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

70649..71200
DNA (552bp) protein (184aa)
General secretion pathway protein G, general secretion pathway protein G {ECO:0000313|EMBL:KKS18759.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
seg 8..27 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein
QZM_D1_scaffold_64_79
RBG_19FT_COMBO_WWE3_34_6_curated, WWE3, Bacteria

Not on your lists

71282..72130
DNA (849bp) protein (283aa)
prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S3J1_DESTD
Tax=RBG_19FT_COMBO_WWE3_34_6_curated
QZM_D1_scaffold_64_80
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

72184..73380
DNA (1197bp) protein (399aa)
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KKS18556.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
Preprotein translocase subunit SecD bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
protein-export membrane protein SecD
QZM_D1_scaffold_64_81
Caldicellulosiruptor owensensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

73396..73860
DNA (465bp) protein (155aa)
Transcription elongation factor GreA Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q4F5_CALOW
grea/greb family elongation factor
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL).;"
QZM_D1_scaffold_64_82
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(73853..75970)
DNA (2118bp) protein (706aa)
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tax=CG_CPR10_01
QZM_D1_scaffold_64_83
unknown

Not on your lists

comp(76061..76573)
DNA (513bp) protein (171aa)

This feature has no annotations

QZM_D1_scaffold_64_84
unknown

Not on your lists

comp(76575..77156)
DNA (582bp) protein (194aa)

This feature has no annotations

QZM_D1_scaffold_64_85
GWA2_OD1_39_41, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(77187..77792)
DNA (606bp) protein (202aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR20861.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWA2_39_41.;"
QZM_D1_scaffold_64_86
unknown

Not on your lists

comp(77740..78393)
DNA (654bp) protein (218aa)

This feature has no annotations

Displaying items 61-90 of 178 in total

View Taxonomy