ggKbase home page

QZM_D1_scaffold_132

Search features with annotation key words

Displaying items 31-60 of 106 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QZM_D1_scaffold_132_30
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

31578..31805
DNA (228bp) protein (76aa)
ATP synthase subunit c {ECO:0000313|EMBL:KKS19269.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
ATP synthase subunit c bin=GWA1_ZB2_49_26 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
atpE; ATP synthase subunit c
QZM_D1_scaffold_132_31
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

31805..32293
DNA (489bp) protein (163aa)
ATP synthase subunit b {ECO:0000313|EMBL:KKS19268.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
ATP synthase F0 complex subunit beta bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
atpF; F0F1-type ATP synthase subunit b
QZM_D1_scaffold_132_32
unknown

Not on your lists

32283..32654
DNA (372bp) protein (124aa)

This feature has no annotations

QZM_D1_scaffold_132_33
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

32654..34168
DNA (1515bp) protein (505aa)
ATP synthase subunit alpha Tax=uncultured bacterium RepID=K1ZKY5_9BACT
ATP synthase subunit alpha {ECO:0000313|EMBL:KKS19266.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
atpA; F0F1 ATP synthase subunit alpha
QZM_D1_scaffold_132_34
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

34158..35051
DNA (894bp) protein (298aa)
ATP synthase F1, gamma subunit Tax=Sulcia muelleri (strain GWSS) RepID=A8Z5R0_SULMW
ATP synthase gamma chain {ECO:0000313|EMBL:KKS19265.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
atpG; ATP synthase F1 subunit gamma
QZM_D1_scaffold_132_35
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

35054..36412
DNA (1359bp) protein (453aa)
ATP F0F1 synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000313|EMBL:KKS19264.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
ATP synthase subunit beta bin=GWA1_ZB2_49_26 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
QZM_D1_scaffold_132_36
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

36399..36653
DNA (255bp) protein (85aa)
atpC; ATP synthase epsilon chain (EC:3.6.3.14)
ATP synthase epsilon chain Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEY4_FUSMR
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
QZM_D1_scaffold_132_37
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

36654..37184
DNA (531bp) protein (177aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054803};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00239}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
Cytidylate kinase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L190_METHD
cytidylate kinase, putative
QZM_D1_scaffold_132_trna_1
unknown

Not on your lists

37261..37331
DNA (71bp)
transferRNA Met
QZM_D1_scaffold_132_38
R_OD1_Magasanikbacteria_41_13, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

37353..38702
DNA (1350bp) protein (450aa)
yumB1; NADH dehydrogenase; K03885 NADH dehydrogenase [EC:1.6.99.3] bin=bin1_lowGC species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_41_13_curated
QZM_D1_scaffold_132_39

Not on your lists

38729..39529
DNA (801bp) protein (267aa)
mutM; Formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:KKT87866.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_10.;"
hypothetical protein
QZM_D1_scaffold_132_40
unknown

Not on your lists

39574..40356
DNA (783bp) protein (261aa)

This feature has no annotations

QZM_D1_scaffold_132_41
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

40368..40904
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Bacillus cereus RepID=J8NN70_BACCE
mechanosensitive ion channel
Uncharacterized protein {ECO:0000313|EMBL:EJS75872.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2X1-3.;"
QZM_D1_scaffold_132_42

Not on your lists

40916..41839
DNA (924bp) protein (308aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
tRNA pseudouridine synthase B {ECO:0000313|EMBL:KKS82261.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_43_10.;"
truB; tRNA pseudouridine 55 synthase
QZM_D1_scaffold_132_43
R_OP11_Levybacteria_41_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

41867..42730
DNA (864bp) protein (288aa)
UniRef90_A5KTL1 Transketolase domain protein Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTL1_9BACT bin=ACD50 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Transketolase protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_41_15_curated
QZM_D1_scaffold_132_44
Parcubacteria bacterium GW2011_GWB1_41_4, Parcubacteria, Bacteria

Not on your lists

42733..44091
DNA (1359bp) protein (453aa)
PREDICTED: uncharacterized protein LOC100211675 Tax=unknown RepID=UPI0002B4D458
Uncharacterized protein {ECO:0000313|EMBL:KKS08187.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_4.;"
hypothetical protein
QZM_D1_scaffold_132_45
Parcubacteria bacterium GW2011_GWB1_41_4, Parcubacteria, Bacteria

Not on your lists

44119..45984
DNA (1866bp) protein (622aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS08189.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_4.;"
Putative uncharacterized protein bin=GWA2_Elusimicrobia_56_46 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
exported protein of unknown function
QZM_D1_scaffold_132_46
RLO_OD1_60_15, Parcubacteria, Bacteria

Not on your lists

46090..46710
DNA (621bp) protein (207aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000363C326
Tax=RIFCSPLOWO2_12_FULL_OD1_60_15_curated
QZM_D1_scaffold_132_47
GWA1_OD1_44_24_partial, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

46717..47592
DNA (876bp) protein (292aa)
Uncharacterized protein Tax=Candidatus Saccharimonas aalborgensis RepID=R4PWJ9_9BACT
exported protein of unknown function
Tax=GWA1_OD1_44_24_partial
QZM_D1_scaffold_132_48
GWB1_OD1_41_12, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

47589..48623
DNA (1035bp) protein (345aa)
Clostripain-related protein {ECO:0000313|EMBL:KKR88977.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWB1_41_12.;"
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
QZM_D1_scaffold_132_49
RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

48625..49422
DNA (798bp) protein (266aa)
id=2169404 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated
QZM_D1_scaffold_132_50
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

49413..50810
DNA (1398bp) protein (466aa)
seg bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
QZM_D1_scaffold_132_51
unknown

Not on your lists

50835..51014
DNA (180bp) protein (60aa)

This feature has no annotations

QZM_D1_scaffold_132_52
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

51016..51420
DNA (405bp) protein (135aa)
Putative uncharacterized protein Tax=Beggiatoa sp. PS RepID=A7BW69_9GAMM
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:KCZ71324.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
QZM_D1_scaffold_132_53
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

51422..52462
DNA (1041bp) protein (347aa)
rsd:TGRD_315 transketolase ; K00615 transketolase [EC:2.2.1.1] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
transketolase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
QZM_D1_scaffold_132_54
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

52459..53154
DNA (696bp) protein (232aa)
D-alanyl-D-alanine carboxypeptidase bin=GWC1_OD1_38_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
vanY; carboxypeptidase
Tax=RBG_16_OP11_Levybacteria_35_11_curated
QZM_D1_scaffold_132_55
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

53141..54415
DNA (1275bp) protein (425aa)
UPI00020A9AB9 related cluster bin=GWA2_Elusimicrobia_56_46 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
(uracil-5)-methyltransferase
Tax=GWC2_Elusimicrobia_56_31_curated
QZM_D1_scaffold_132_56
GWA2_OD1_41_22_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

54412..55089
DNA (678bp) protein (226aa)
hypothetical protein Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B3E132
Uncharacterized protein {ECO:0000313|EMBL:KKS01164.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_41_22.;"
QZM_D1_scaffold_132_57
unknown

Not on your lists

55082..55408
DNA (327bp) protein (109aa)

This feature has no annotations

QZM_D1_scaffold_132_58
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55337..55837)
DNA (501bp) protein (167aa)
Putative NTP pyrophosphohydrolase Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVZ6_SOLCM
putative NTP pyrophosphohydrolase
Putative NTP pyrophosphohydrolase {ECO:0000313|EMBL:AFD06899.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Displaying items 31-60 of 106 in total

View Taxonomy