ggKbase home page

QZM_D1_scaffold_132

Search features with annotation key words

Displaying items 61-90 of 106 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QZM_D1_scaffold_132_59
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

55988..56254
DNA (267bp) protein (89aa)
Ribosome maturation factor RimP Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CEP0_KOSOT
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
QZM_D1_scaffold_132_60
GWC1_OD1_36_108, Parcubacteria, Bacteria

Not on your lists

56238..56921
DNA (684bp) protein (228aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000313|EMBL:KKP90387.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_36_108.;"
QZM_D1_scaffold_132_61
unknown

Not on your lists

comp(56918..57190)
DNA (273bp) protein (91aa)

This feature has no annotations

QZM_D1_scaffold_132_62
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists


comp(57200..59188)
DNA (1989bp) protein (663aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036FB867
Phenylalanine-tRNA ligase beta subunit {ECO:0000313|EMBL:KKS18192.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
phenylalanyl-tRNA synthetase beta chain
QZM_D1_scaffold_132_63
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists


comp(59178..60182)
DNA (1005bp) protein (335aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
pheS; phenylalanine--tRNA ligase (EC:6.1.1.20)
Phenylalanine-tRNA ligase alpha subunit {ECO:0000313|EMBL:KKS18193.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
QZM_D1_scaffold_132_64
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(60182..60772)
DNA (591bp) protein (197aa)
Recombination protein RecR {ECO:0000313|EMBL:KKS19310.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
Recombination protein RecR bin=GWA1_ZB2_49_26 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
recR; recombination protein RecR
QZM_D1_scaffold_132_65
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(60772..62124)
DNA (1353bp) protein (451aa)
DNA helicase Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000374E9DF
Replicative DNA helicase {ECO:0000313|EMBL:KKS19311.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
hypothetical protein
QZM_D1_scaffold_132_trna_2
unknown

Not on your lists

62233..62304
DNA (72bp)
transferRNA Glu
QZM_D1_scaffold_132_trna_3
unknown

Not on your lists

62309..62382
DNA (74bp)
transferRNA Ala
QZM_D1_scaffold_132_trna_4
unknown

Not on your lists

62394..62464
DNA (71bp)
transferRNA Arg
QZM_D1_scaffold_132_66
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

62466..63287
DNA (822bp) protein (274aa)
Tagatose-bisphosphate aldolase {ECO:0000313|EMBL:KKS19017.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
Tagatose-bisphosphate aldolase bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tagatose-bisphosphate aldolase
QZM_D1_scaffold_132_67
unknown

Not on your lists

comp(63328..65556)
DNA (2229bp) protein (743aa)

This feature has no annotations

QZM_D1_scaffold_132_68
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(65560..66726)
DNA (1167bp) protein (389aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003715076
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
QZM_D1_scaffold_132_69
GWA1_OD1_42_19_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(66723..67196)
DNA (474bp) protein (158aa)
transcription elongation factor GreA Tax=[Clostridium] glycolicum RepID=UPI000370C338
Transcription elongation factor {ECO:0000313|EMBL:KKS46587.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA1_42_19.;"
transcription elongation factor GreA
QZM_D1_scaffold_132_70

Not on your lists

67291..68277
DNA (987bp) protein (329aa)
Ribosome-binding ATPase YchF Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TIU8_CALNY
Uncharacterized protein {ECO:0000313|EMBL:KKN91795.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GTP-binding protein ychf
QZM_D1_scaffold_132_71
R_RIF_OD1_07_47_27, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


68299..68667
DNA (369bp) protein (123aa)
30S ribosomal protein S6 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X250_NITSE
30S ribosomal protein s6
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_47_27_curated
QZM_D1_scaffold_132_72
R_RIF_OD1_13_47_10, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

68654..69085
DNA (432bp) protein (144aa)
Single-stranded DNA-binding protein bin=GWC1_OD1_38_17 species=Eikenella corrodens genus=Eikenella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
single-strand binding protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_47_10_curated
QZM_D1_scaffold_132_73
Thermodesulfobium narugense, Thermodesulfobium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

69088..69294
DNA (207bp) protein (69aa)
Translation initiation factor IF-1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E6S6_9FIRM
Translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermodesulfobiaceae; Thermodesulfobium.;" source="Thermodesulfobium narugense DSM 14796.;"
QZM_D1_scaffold_132_74
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

69298..69822
DNA (525bp) protein (175aa)
ATP:cob(I)alamin adenosyltransferase bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
ATP/cobalamin adenosyltransferase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_48_16_curated
QZM_D1_scaffold_132_75
unknown

Not on your lists

70104..71147
DNA (1044bp) protein (348aa)

This feature has no annotations

QZM_D1_scaffold_132_76
GWC2_OD1_i_40_12, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

71197..71763
DNA (567bp) protein (189aa)
LemA-like protein Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B255F bin=ACD12 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
LemA-like protein {ECO:0000313|EMBL:KKR44063.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_40_12.;"
membrane protein
QZM_D1_scaffold_132_77
Edwardsiella piscicida, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71820..73232
DNA (1413bp) protein (471aa)
PREDICTED: protein starmaker-like isoform X1 Tax=Ceratitis capitata RepID=UPI000329E452
Cell surface protein {ECO:0000313|EMBL:AGH74471.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella piscicida C07-087.;"
hypothetical protein
QZM_D1_scaffold_132_trna_5
unknown

Not on your lists

73277..73349
DNA (73bp)
transferRNA Pro
QZM_D1_scaffold_132_78
RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

73359..74462
DNA (1104bp) protein (368aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00036EC0ED
hypothetical protein
Tax=RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated
QZM_D1_scaffold_132_79
RIFOXYD1_FULL_OD1_36_11_curated, Parcubacteria, Bacteria

Not on your lists

74502..78005
DNA (3504bp) protein (1168aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Tax=RIFOXYD1_FULL_OD1_36_11_curated
QZM_D1_scaffold_132_80
CG_CPR03_02, CG_CPR03, Bacteria

Not on your lists


78008..78337
DNA (330bp) protein (110aa)
Nucleotide-binding protein Tax=Thermofilum sp. 1910b RepID=S5ZCD3_9CREN
methionyl-tRNA synthetase
Tax=CG_CPR03_02
QZM_D1_scaffold_132_81
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

78338..79096
DNA (759bp) protein (253aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037E8CD6
Methionine aminopeptidase {ECO:0000313|EMBL:KKS19016.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
methionine aminopeptidase, type I
QZM_D1_scaffold_132_82
unknown

Not on your lists

79149..79355
DNA (207bp) protein (69aa)

This feature has no annotations

QZM_D1_scaffold_132_83
unknown

Not on your lists

79391..79897
DNA (507bp) protein (169aa)

This feature has no annotations

QZM_D1_scaffold_132_trna_6
unknown

Not on your lists

comp(79907..79991)
DNA (85bp)
transferRNA Tyr
Displaying items 61-90 of 106 in total

View Taxonomy