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RBG_13_scaffold_72940_curated_6

Organism: Deltaproteobacteria bacterium RBG_13_51_10

partial RP 26 / 55 BSCG 29 / 51 ASCG 6 / 38
Location: comp(2742..3914)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor id=4541187 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 396.0
  • Bit_score: 446
  • Evalue 2.60e-122
  • rbh
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 393.0
  • Bit_score: 431
  • Evalue 3.60e-118
  • rbh
Tax=RBG_13_Deltaproteobacteria_51_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 391.0
  • Bit_score: 738
  • Evalue 6.10e-210

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Taxonomy

RBG_13_Deltaproteobacteria_51_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGCCAGCCATGGATTGGAGGGCAGAGGGGTTTTCTTCAGGTACCAAAAGGGTTGACGAAGAAGAGGATCGTCCCACCTTTGAAAATTTTTTAACCAAGAAAGCCACCCTGTATGATCACCTTTTGTGGCAAATTCGGCTGAGTAATTTCGACGAAGAAGAATGTTTGATAGCCACGGTGATTATTGGCAACCTCAATGAAGATGGCCTGCTTCAAGGATCCCTGGAAGAAATTGCCGCTCAATCCGGGTTCGATCTGGCGAATATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGGGTGGCGGCGCGGGATTTGAAAGAATGCCTGCTCTTGCAGGCTCAGCAAATTTATCCAGGTGAGCTTCTGGTGCAGAAGATCATCCAGGGCCATCTTGACCATTTGGCCAAAAAAAATTACCAGGCGATTGCCAAGGAATTGGGAATCCAGGTAGAAGAAGTGGTGCGAGCCACACGACTGATCAATGAACTCGATCCCAAGCCTGGCAGGGGTTACAGCGACGAGAACATTCCTTACATTATCCCCGACGTCTACGTTTACAAAATCGGAGAGGAGTACGTAGTCGTGCTCAACGAGGATGGTATGCCCAAGTTGCGCATCAACCCTTATTACCGGCATATTCTCAGGGAACAGGTTCAATCCGCCGGGGAAGCCAAAGAGTACATCAACGAAAAAATTCGTTCGGCCCTATGGTTGATCAAATCGATTCATCAACGCCAGCGAACGATTTACCGGGTGACCAAGTCGATCGTCCGCTTTCAGCGAGAATTCCTGGATAAAGGCGTGGCCTATTTAAAGCCCATGGTTCTCAAAGACGTAGCCATGGACGTGGAGATGCATGAATCCACCATCAGCCGGGTGACTTCGAATAAATATGTACATACCCCCCAAGGCATCTTTGAGTTAAAATATTTCTTCAATAGCAGTATCAATACCGTTCGAGGGGAAAATATCGCTTCCGAAAGCGTCAAAGAGAAAATTCGTGAAATTCTATCCAAAGAGGCCTCCCAGAAACCTTACAGTGACCAAGAACTGGTGGAACTTCTCAAGAAACAGGATATTTTGATTGCACGCCGAACCGTGACCAAGTATCGCGAGATGCTTGGGGTTCTCTCTTCAACCCGGAGGAAGCAAATCATCTAA
PROTEIN sequence
Length: 391
MPAMDWRAEGFSSGTKRVDEEEDRPTFENFLTKKATLYDHLLWQIRLSNFDEEECLIATVIIGNLNEDGLLQGSLEEIAAQSGFDLANMXXXXXXXXXXXXXXVAARDLKECLLLQAQQIYPGELLVQKIIQGHLDHLAKKNYQAIAKELGIQVEEVVRATRLINELDPKPGRGYSDENIPYIIPDVYVYKIGEEYVVVLNEDGMPKLRINPYYRHILREQVQSAGEAKEYINEKIRSALWLIKSIHQRQRTIYRVTKSIVRFQREFLDKGVAYLKPMVLKDVAMDVEMHESTISRVTSNKYVHTPQGIFELKYFFNSSINTVRGENIASESVKEKIREILSKEASQKPYSDQELVELLKKQDILIARRTVTKYREMLGVLSSTRRKQII*