ggKbase home page

RBG_13_OP3_44_8_RBG_13_scaffold_13023_2

Organism: Omnitrophica WOR_2 bacterium RBG_13_44_8b

partial RP 42 / 55 MC: 1 BSCG 40 / 51 ASCG 7 / 38 MC: 1
Location: comp(3328..4293)

Top 3 Functional Annotations

Value Algorithm Source
type II restriction endonuclease AvaI n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B3835B similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 314.0
  • Bit_score: 364
  • Evalue 8.20e-98
avaIR; type II site-specific deoxyribonuclease similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 319.0
  • Bit_score: 348
  • Evalue 1.90e-93
Probable type II site-specific deoxyribonuclease {ECO:0000313|EMBL:ACB50423.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 319.0
  • Bit_score: 348
  • Evalue 1.20e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cyanothece sp. ATCC 51142 → Cyanothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 966
GTGGGCAAAACAGCTTGTAAGAAATTTATCAAAAGCTCTGCTTCTTTGGTAACTCCCTATGAGCAGACAAGGGCTGGTTTTGTTGCTCTTGCGCTGGAAAAGAATAGGTTAGGGACACCTTATGTTGAAGAGGCTAAAGTTTTAAAGGTCGAAGCTTCAAAAGTAAAAACTTCACACGATCTTCTAAAATTAAAAAGTATTAGACCAGCTTTATTAACAGCGGCTGGAGTTTCCGAGAAAGCCAGCGGTCATTTAACAGATAAACATAAAACGGAAGCTATTCGGGGCCTCATTGAAAATTTTTTGGACCCAGCCGGAAGGGATTTCATTGAAGAGCTTGTTTATAGGTTTCTTTTGACAAAAGGCGATTCCTTGGGTGGAAGCATGCGAAATTTAGCAGGAAAATTAGGAGAAAAGAAATTTATTCGTTCACTTATTTCGTCTTTATCTGTAAGAGGGAGAGAATTTGGATGGCGCGATAGCAAGACAAACAAATGGATCAGAGGGGATGAGCAAGCAGTAGAAATTGAGACAAGCGCAAATGCTATTTCTTGGCAAACAGAAGGTCAGTCAAGAGTTTTGATATTCAATATTGTAGTTCCAATACTAAAAAAGAATGTCGATTTATCTTTACTCAATTGTTTTGAAAGAGATATAGATTCTGGATCCAAGCCCGCATATTTCTATCCGGAAAAATACATAGCTTTGGGAGAGTTAAAAGGCGGGATTGATCCAGCTGGTGCAGATGAACACTGGAAAACGGCATATTCAGCGCTCGATCGCATTAGAAAGGCATTTGCCGGAAAGAAGCTTAGGCCTTATACTTTTTTTGTGGGGGCTGCAATCGAAAAAGCCATGGCTAAAGAGATTTTCTCGCAGCTTCGGAAAGGCACATTAAGTTGTGCTGGTAATTTAACTGTGGATAAGCATCTAATAGAGATTTGCGGTTGGTTAATAGACTTATAA
PROTEIN sequence
Length: 322
VGKTACKKFIKSSASLVTPYEQTRAGFVALALEKNRLGTPYVEEAKVLKVEASKVKTSHDLLKLKSIRPALLTAAGVSEKASGHLTDKHKTEAIRGLIENFLDPAGRDFIEELVYRFLLTKGDSLGGSMRNLAGKLGEKKFIRSLISSLSVRGREFGWRDSKTNKWIRGDEQAVEIETSANAISWQTEGQSRVLIFNIVVPILKKNVDLSLLNCFERDIDSGSKPAYFYPEKYIALGELKGGIDPAGADEHWKTAYSALDRIRKAFAGKKLRPYTFFVGAAIEKAMAKEIFSQLRKGTLSCAGNLTVDKHLIEICGWLIDL*