ggKbase home page

RBG_16_DPX2_64_85_RBG_16_scaffold_8519_3

Organism: Deltaproteobacteria bacterium RBG_16_64_85

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(2083..3300)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02283 pilus assembly protein CpaF Tax=RBG_16_Deltaproteobacteria_64_85_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 405.0
  • Bit_score: 794
  • Evalue 5.70e-227
type II secretion system protein E; K02283 pilus assembly protein CpaF id=14624454 bin=bin5_DeltaP species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 404.0
  • Bit_score: 595
  • Evalue 3.60e-167
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 394.0
  • Bit_score: 427
  • Evalue 4.80e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_64_85_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGAACATCGACCTGTGTCGATCCCTGCACAAGAAGGTAATTTCGCACCTCGATACCCGGAATACGGGAATCTTTCCGGAGGCTGAGGGAAAATGGCGCACCCGCGCTGAAGAATGCCTGCGTGCCGAGATGAAAGATCTGGATCTTCCCGAACAAGAGAAGGAAATCCTGCGAAGAGGGACTCTGGACGAAATCTTTGCTTACGGCCCCCTTACAAGGTATCTCCAGGATCCCTCCATTTCCGAAATCATGGTCAACGGAAAGGATCTGATTTATGTCGAGCGCGAAGGGAAGGTAACGCTCTCGGGCATCGTTTTTCTCAGCGATGAAACCCTTCGCTCAACGATCGACCGGATGGTGTCCAAGGTCAACCGCCGCCTGGATGAGTCGTCTCCCTTTGTGGACGCCAGGTTGCAGGACGGATCCCGGGTGAACGCGATCATTCCACCGGTGAGCCTTACCGGGCCTTGCCTGACCATCCGCAAGTTTCGCAAGGAACCCTACTCTCTGGAAGAACTGATTCGCATAGGTACGTTAACCGCAGACGCGTCCGCATATCTTCGCGAAGCCGTGGTTCGCCGGATGAGCATCATCATATCGGGCGGAACAGGGTCCGGGAAGACCACCCTGCTCAACGCCCTTTCGCAGTTCATCCCTGACTCGGAAAGAATCATCACCATCGAAGACGCCGCTGAAATCCGTTTGATGAAACCACACGTTGTCCGCCTGGAAGCGCGGCCACCCAATATTGAGGGGACCGGCGCAATCACCATAAGGGATTTGGTACGAAATTCCCTCCGTATGCGCCCCGATCGCATCGTCATCGGTGAATGCCGCGGGGGGGAAGCGCTTGACATGCTGCAGGCCATGAACACCGGGCACGATGGGTCCATCACCACAGGCCATGCCAATTCCCCACGAGACATGCTGCGCCGCCTCGAAACCATGGTCCTTCTGTCGGGGGTAGAGATACCCGTCAGGGCCATCCGCGAACAAATTGCCTCCGCCATCGATGTCATCGTTCACACCTGCCGGATGGGTGACGGCAAGAGGACGGTCACCTCAATCGTCGAGGTTACGGGGATGGGAGAAACCCAAATTCTCTTACAGGAGATCTTCCGGTCGTCGAAAAACGAGGGACCGCCCGGCAAGATGGGTCTGATTCCGACGGGCGTCCCGTCCAAGTTTTTCCTCTCGGAGGGGAATGGATGGGATTAA
PROTEIN sequence
Length: 406
MNIDLCRSLHKKVISHLDTRNTGIFPEAEGKWRTRAEECLRAEMKDLDLPEQEKEILRRGTLDEIFAYGPLTRYLQDPSISEIMVNGKDLIYVEREGKVTLSGIVFLSDETLRSTIDRMVSKVNRRLDESSPFVDARLQDGSRVNAIIPPVSLTGPCLTIRKFRKEPYSLEELIRIGTLTADASAYLREAVVRRMSIIISGGTGSGKTTLLNALSQFIPDSERIITIEDAAEIRLMKPHVVRLEARPPNIEGTGAITIRDLVRNSLRMRPDRIVIGECRGGEALDMLQAMNTGHDGSITTGHANSPRDMLRRLETMVLLSGVEIPVRAIREQIASAIDVIVHTCRMGDGKRTVTSIVEVTGMGETQILLQEIFRSSKNEGPPGKMGLIPTGVPSKFFLSEGNGWD*