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RBG_16_Gammaproteobacteria_65_31_RBG_16_scaffold_37941_1

Organism: Candidatus Muproteobacteria bacterium RBG_16_65_31

near complete RP 44 / 55 MC: 1 BSCG 44 / 51 MC: 2 ASCG 9 / 38 MC: 3
Location: comp(37..891)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KIH9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 288.0
  • Bit_score: 324
  • Evalue 8.40e-86
rpoH; RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 284.0
  • Bit_score: 456
  • Evalue 2.00e-125
rpoH; RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 284.0
  • Bit_score: 322
  • Evalue 1.50e-85

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Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAGTCAATCGCTGGCGCTGGCCATTAATCTCTATCCCGACAAGGGCTTGTCCGCCTATATCCGGGCGGTGAACGCGCTGCCGGTGCTGGACGCCGCCGCAGAGCGCCGCCTGGCGCGCCGCTTCCACCGCCACAACGACCTGGACGCCGCCCGCCAGCTGGTCATGACGCATCTGCGCTATGTGGCGCGCATCGCGCGCGGTTTCTCCGGCTACGGCCTGCCGCAGGCGGACCTGATTCAGGAGGGCAACATCGGCCTGATGAAGGCGGTCAAGCACTACGATCCCAAACACAAGGTGCGGCTGATGTCGTTCGCCGTGCACTGGATCCGCGCCGAGATCTACGATTACATCCTGCGCAACTGGCGCATCGTCAAGGTCGCCACCACCAAGGCGCAGCGCAAGCTCTTCTTCAATCTGCGCAAGTCGCGCGTGCGCCTCGGCTGGATGACGCGCGGCGAGGTGGACACGCTGGCGGCGAGGCTCGACGTCGCGCCGGAGACGGTGCGGGAGATGGAGTCGCGCATGAGCTATGCGGACGTCCCGTTCGACGCCGACGTGGACACCGACGACGATGAATTCCATGCCGCCCCGGCTGGGTACCTCCAGGACATGCGCTACAATCCGGAGGCCCTGGCGGCCAAGTCCGATGCGGAAAATACGCGCGCGGACCAGCTGCGGGCGGCGCTGTCGTCCCTCGACAAGCGCAGCCGCGACATCATCCGCCGCCGCTGGCTGGACGAGGACAAGCCCACGCTGCACGAGCTCGCCGCCGAGTACGACGTCTCCGCCGAGCGCATCCGCCAGATCGAGGTCAAGGCGCTGCACGCGATGAAAGACGTGCTCGCGGCCTAA
PROTEIN sequence
Length: 285
MSQSLALAINLYPDKGLSAYIRAVNALPVLDAAAERRLARRFHRHNDLDAARQLVMTHLRYVARIARGFSGYGLPQADLIQEGNIGLMKAVKHYDPKHKVRLMSFAVHWIRAEIYDYILRNWRIVKVATTKAQRKLFFNLRKSRVRLGWMTRGEVDTLAARLDVAPETVREMESRMSYADVPFDADVDTDDDEFHAAPAGYLQDMRYNPEALAAKSDAENTRADQLRAALSSLDKRSRDIIRRRWLDEDKPTLHELAAEYDVSAERIRQIEVKALHAMKDVLAA*