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RBG_16_NSX_64_22_RBG_16_scaffold_2338

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Displaying items 31-51 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_2338_29
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(20586..20783)
DNA (198bp) protein (66aa)
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Nitrospirae_64_22_curated
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 id=24436850 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Phascolarctobacterium sp. CAG:266 genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
rpmD; 50S ribosomal protein L30
RBG_16_NSX_64_22_RBG_16_scaffold_2338_30
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(20780..21322)
DNA (543bp) protein (181aa)
30S ribosomal protein S5 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RS5_MOOTA
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Nitrospirae_64_22_curated
rpsE; 30S ribosomal protein S5
RBG_16_NSX_64_22_RBG_16_scaffold_2338_31
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(21323..21673)
DNA (351bp) protein (117aa)
50S ribosomal protein L18 n=1 Tax=Ureibacillus thermosphaericus RepID=UPI0002FC5D11
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L18
RBG_16_NSX_64_22_RBG_16_scaffold_2338_32
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(21698..22237)
DNA (540bp) protein (180aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L6 id=4261432 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
rplF; 50S ribosomal protein L6
RBG_16_NSX_64_22_RBG_16_scaffold_2338_33
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(22248..22646)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RS8_HALOH
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Nitrospirae_64_22_curated
30S ribosomal protein S8
RBG_16_NSX_64_22_RBG_16_scaffold_2338_34
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(22654..22839)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RS14Z_SYNFM
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Nitrospirae_64_22_curated
rpsN; 30S ribosomal protein S14
RBG_16_NSX_64_22_RBG_16_scaffold_2338_35
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(22908..23447)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCW4_9BACT
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_16_Nitrospirae_64_22_curated
rplE; 50S ribosomal protein L5
RBG_16_NSX_64_22_RBG_16_scaffold_2338_36
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(23473..23820)
DNA (348bp) protein (116aa)
ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L24 id=4627868 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ribosomal protein L24
RBG_16_NSX_64_22_RBG_16_scaffold_2338_37
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(23822..24190)
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L14 id=1900129 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
rplN; 50S ribosomal protein L14
RBG_16_NSX_64_22_RBG_16_scaffold_2338_38
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(24197..24496)
DNA (300bp) protein (100aa)
30S ribosomal protein S17 n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FQL0_9FIRM
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RBG_16_Nitrospirae_64_22_curated
30S ribosomal protein S17
RBG_16_NSX_64_22_RBG_16_scaffold_2338_39
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(24493..24753)
DNA (261bp) protein (87aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L29 id=1900125 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
50S ribosomal protein L29
RBG_16_NSX_64_22_RBG_16_scaffold_2338_40
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(24750..25169)
DNA (420bp) protein (140aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L16 id=4034732 bin=GWC2_Nitrospirae_57_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
50S ribosomal protein L16
RBG_16_NSX_64_22_RBG_16_scaffold_2338_41
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(25190..25864)
DNA (675bp) protein (225aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Nitrospirae_64_22_curated
30S ribosomal protein S3 id=4795582 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
30S ribosomal protein S3
RBG_16_NSX_64_22_RBG_16_scaffold_2338_42
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(25869..26261)
DNA (393bp) protein (131aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L22 id=1900119 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
rplV; 50S ribosomal protein L22
RBG_16_NSX_64_22_RBG_16_scaffold_2338_43
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(26267..26563)
DNA (297bp) protein (99aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_16_Nitrospirae_64_22_curated
Ribosomal protein S19/S15 id=1900117 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
ribosomal protein S19
RBG_16_NSX_64_22_RBG_16_scaffold_2338_44
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(26574..27392)
DNA (819bp) protein (273aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L2 id=4795588 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
50S ribosomal protein L2
RBG_16_NSX_64_22_RBG_16_scaffold_2338_45
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(27402..27692)
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LL09_THEPS
rplW; 50S ribosomal protein L23 Tax=RBG_16_Nitrospirae_64_22_curated
rplW; 50S ribosomal protein L23
RBG_16_NSX_64_22_RBG_16_scaffold_2338_46
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(27689..28336)
DNA (648bp) protein (216aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L4 id=3967646 bin=GWF2_Nitrospirae_44_13 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
rplD; 50S ribosomal protein L4
RBG_16_NSX_64_22_RBG_16_scaffold_2338_47
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(28451..29092)
DNA (642bp) protein (214aa)
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L3 id=4795594 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
rplC; 50S ribosomal protein L3
RBG_16_NSX_64_22_RBG_16_scaffold_2338_48
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(29148..29468)
DNA (321bp) protein (107aa)
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Nitrospirae_64_22_curated
30S ribosomal protein S10 id=4795596 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
30S ribosomal protein S10
RBG_16_NSX_64_22_RBG_16_scaffold_2338_49
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(29586..29678)
DNA (93bp) protein (31aa)
Elongation factor Tu n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKT4_DESB2
elongation factor Tu Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
translation elongation factor 1A (EF-1A/EF-Tu)
Displaying items 31-51 of 51 in total

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