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RBG_16_NSX_64_22_RBG_16_scaffold_2338_20

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(15326..15952)

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 407
  • Evalue 1.30e-110
30S ribosomal protein S4 id=2692946 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 209.0
  • Bit_score: 299
  • Evalue 2.80e-78
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 208.0
  • Bit_score: 297
  • Evalue 2.30e-78

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 627
GTGGCGCGTTATATCGGnnnnnnGTGCCGGCTCTGCCGGCGGGAGGGGGTCAAGCTCTTCCTGAAAGGGGACCGTTGCTTCAAGGACAAGTGCGCGATCGAACGGCGCAATTACGCGCCGGGTCAGCACGGACAGCGGCGGTCGAAGGTCTCGGACTACGGCGTCCAGCTCCGCGAGAAGCAGAAGGTCCGCCGTGTGTACGGCGTGATGGAACGCCAGTTCCGGGGATACTTTGAGAAAGCCGAGCGGAAGAAAGGAATCACGGGAGAGAACCTGCTCCGGATGCTGGAGCAGAGGCTGGACAACGTCGTCTACCGGCTGGGATTCGCGTTCTCCCGCAACGAAGCGCGGCAGTTCCTCCGGCACGGCCATATCGACGTGAACGGGCGGCGCGTGACGATTCCGTCGTTCCTGGTCTCGGCCGGGGACGTCGTCGCGATCCGGGAAAAGAGCCGTTCTCTGCCCCGCGTTGTCGAGGCGATGGCGGCGGTCGACCGGAGGGAGATTCCGTCCTGGCTCGTCCTCGAAAAGGAGGCCTTCCGGGGGCGGGTCGCGAGCCTTCCGACTCGCGAGGACATCCAGATTCCGGTCCGGGAACAATTGATCGTCGAGCTGTATTCGAAATAG
PROTEIN sequence
Length: 209
VARYIXXXCRLCRREGVKLFLKGDRCFKDKCAIERRNYAPGQHGQRRSKVSDYGVQLREKQKVRRVYGVMERQFRGYFEKAERKKGITGENLLRMLEQRLDNVVYRLGFAFSRNEARQFLRHGHIDVNGRRVTIPSFLVSAGDVVAIREKSRSLPRVVEAMAAVDRREIPSWLVLEKEAFRGRVASLPTREDIQIPVREQLIVELYSK*