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RBG_16_NSX_64_22_RBG_16_scaffold_5117_8

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(3772..4341)

Top 3 Functional Annotations

Value Algorithm Source
rpoE2; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 374
  • Evalue 6.60e-101
ECF-family RNA polymerase sigma factor id=3467754 bin=GWC2_Proteo_65_14_Ab886 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 190.0
  • Bit_score: 163
  • Evalue 2.80e-37
rpoE2; RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 186.0
  • Bit_score: 144
  • Evalue 3.80e-32

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCTCCGGAAGAGCGCGATCTGGTCCGGGCGGCCCGGAGCGGGGACGATGATGCGTTCGGCCGACTCGTGGAAAAGACCCAATCCCGTCTCGTGCGCCTGATTCGCGGGATTGTGAGGGACGACGATGAAGCCATGGATCTGGTCCAGGAAACGTACATCAAGGCCCACCGCTCGCTCGACACGTTCAGGGAAGGCTCGGCTTTCGGGACCTGGCTCCACCGGATCGGCGTGAACGCCGCGATCGATCATCTGCGAAAGCGGTCCGCATTCTCCCCCGCGTCCCTGGAAGACGCCGGGTCTTGGGAGGGCGGAGGTGAAGATCCCGCGGGGACGAGCGGCCGGCCGACGCCCGACCGCCTGCTCGAAGGGGAAGAGGCCGGAAAGGCCATTCGGCGGGCGTTGGAGTCCATGCCGCCCGAGCACAAGGCGACGATCCTGCTGAGGGAACTCGAAGGCTTGTCGTACGACGAGATTGCGGAGATCACCGGCGCGGCCGTGGGGACGGTGATGTCCCGGTTGTTCTATGTCCGCCGGAAGCTCCGCGACGCCCTGAGGGAGCACCGATGA
PROTEIN sequence
Length: 190
MAPEERDLVRAARSGDDDAFGRLVEKTQSRLVRLIRGIVRDDDEAMDLVQETYIKAHRSLDTFREGSAFGTWLHRIGVNAAIDHLRKRSAFSPASLEDAGSWEGGGEDPAGTSGRPTPDRLLEGEEAGKAIRRALESMPPEHKATILLRELEGLSYDEIAEITGAAVGTVMSRLFYVRRKLRDALREHR*