ggKbase home page

RBG_16_NSX_64_22_RBG_16_scaffold_1397_24

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 27447..28517

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD; K02005 HlyD family secretion protein Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 356.0
  • Bit_score: 683
  • Evalue 1.60e-193
Efflux transporter, RND family, MFP subunit id=4002145 bin=GWC2_Nitrospirae_57_13 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 348.0
  • Bit_score: 287
  • Evalue 2.40e-74
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 372.0
  • Bit_score: 180
  • Evalue 9.00e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1071
ATGGCGCGTCTCCGGGTGTTTCTGGTCATCGCGGTGGTCGTGATGATCGTTGGTGTCGGACTCTGGCTCTGGCTGAGGCCCAAGCCGGTGGCCGTCAAGTACGTCGTTCTCAAGCGCGCCGATATGATTGTGTCCGTGTTCCCCACAACGACGTCGACAATCCGGTCGGACAACGAGGTGACGATCTCCGCCCAGCGGAACGGACGGATCACGCATCTTCCGGTTGAGGAGGGCGATTCCGTCGCGAAGGGGCAGATCGTGTGCCGGCTCGATCTCTCGGAAGAGACCGCGCGCGTCTTCGCGGAGCGGGACCAGGCCCGGGCGGCGCTGACGGAGGCCGAGCGGACGTTTGCCAGGCTCCAGGGTCTCTTTTCCAAGGGGTACGTCTCCCAGCAGGAAGTCGATGCCGCGAAGAAGGGGAGGGACGCCGCCAGGGCCCTGGTGACGGGACTCGATGAGGCGGCCGCCCAGTACGAGAAATATTCCGTTCTCCGCGCCCCGTTCGACGGCGTGATATCGAGCCGGCCCGTCCAGGCCGGGGACCTCGTGACGGTTGGGAAGCCGATCGTGACGATCGTCGACCCGACCCGACGCTACATCTCCTCGACGATCGACGAAGTGGACGTAGCCCGCCTTTCCCTCCAACAGCCCGTCAAGGTCGCGATTGACGCCTTCCCCGGCAAGACGTTCGAGGCGGTGGTCGACCGCATCTCTCCCGTCGTCACGGGCGGCAAGCTGGAGACGAGGACGTTCGAGACCCGGAGCCGGTTCCTCCCGCCCGTCCCGTCCGTGAAGCCCGGCATGAGCGCCGACGTGGAGATCCTCACCGAGAGGGTCGCGGGGGCGCTCTCCGTCCCGACGCCGGCCGTGGTGGACAGGAAGGGGGAGAAGATCGTCTATCGGCTGATCGGCGGGCGGGCCGTCGCGACGCCCGTCCGGATCGGGCTTTCCAACTGGAACGTGACGGTTGTGGAATCAGGCCTGGCCGAAGGGGAGCAGGTCATTCTGACGCCGGACGTCACCGGGATGGGGGACGGCGTGAGGGCGACCGGGACGGCCGCGGAGGGGTGA
PROTEIN sequence
Length: 357
MARLRVFLVIAVVVMIVGVGLWLWLRPKPVAVKYVVLKRADMIVSVFPTTTSTIRSDNEVTISAQRNGRITHLPVEEGDSVAKGQIVCRLDLSEETARVFAERDQARAALTEAERTFARLQGLFSKGYVSQQEVDAAKKGRDAARALVTGLDEAAAQYEKYSVLRAPFDGVISSRPVQAGDLVTVGKPIVTIVDPTRRYISSTIDEVDVARLSLQQPVKVAIDAFPGKTFEAVVDRISPVVTGGKLETRTFETRSRFLPPVPSVKPGMSADVEILTERVAGALSVPTPAVVDRKGEKIVYRLIGGRAVATPVRIGLSNWNVTVVESGLAEGEQVILTPDVTGMGDGVRATGTAAEG*