ggKbase home page

rifcsphigho2_01_scaffold_52911

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_52911_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(2..1084)
-----------------
DNA (1083bp)
protein (361aa)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=CG_Woesearch_02
thymidine phosphorylase (EC:2.4.2.4)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038087F2
rifcsphigho2_01_scaffold_52911_2
unknown

Not on your lists

comp(1068..1952)
-----------------
DNA (885bp)
protein (295aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CCA3F
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAG4_HALJB Tax=AR20
hypothetical protein
rifcsphigho2_01_scaffold_52911_3
unknown

Not on your lists

2153..2617
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52911_4
RLO_OD1_Falkowbacteria_42_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2805..3014)
-----------------
DNA (210bp)
protein (70aa)
MutT/nudix family protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S62_SYMTH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_42_13_curated
mutT/nudix family protein
rifcsphigho2_01_scaffold_52911_5
unknown

Not on your lists

comp(3052..3198)
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52911_6
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3198..4589)
-----------------
DNA (1392bp)
protein (464aa)
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=AR19
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=5099737 bin=WS6_GWC1_33_20 species=WS6_GWC1_33_22 genus=WS6_GWC1_33_22 taxon_order=WS6_GWC1_33_22 taxon_class=WS6_GWC1_33_22 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39)
rifcsphigho2_01_scaffold_52911_7
unknown

Not on your lists

comp(4624..5334)
-----------------
DNA (711bp)
protein (237aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52911_8
unknown

Not on your lists

comp(5335..6075)
-----------------
DNA (741bp)
protein (247aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52911_9
unknown

Not on your lists

6231..6449
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52911_10
unknown

Not on your lists

6453..6842
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52911_11
unknown

Not on your lists

6878..7543
-----------------
DNA (666bp)
protein (222aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52911_12

Not on your lists

7555..7713
-----------------
DNA (159bp)
protein (53aa)
hypothetical protein
id=5044087 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54649.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_01_scaffold_52911_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7697..8137)
-----------------
DNA (441bp)
protein (147aa)
PilT protein domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG95_RHOMR
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:AEN73296.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
rifcsphigho2_01_scaffold_52911_14
unknown

Not on your lists

comp(8134..9012)
-----------------
DNA (879bp)
protein (293aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52911_15

Not on your lists

comp(9018..9254)
-----------------
DNA (237bp)
protein (79aa)
Marine sediment metagenome DNA, contig: S12H4_L03704 {ECO:0000313|EMBL:GAI83448.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_52911_16
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

9358..10275
-----------------
DNA (918bp)
protein (306aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C6874
transposase Tax=CG_Pacearch_06
hypothetical protein
rifcsphigho2_01_scaffold_52911_17
Pyrococcus sp. GI-H, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10300..11523
-----------------
DNA (1224bp)
protein (408aa)
PspGI methylase id=4807157 bin=GWC2_Elusimicrobia_51_8 species=Pyrococcus sp. GI-H genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
PspGI methylase {ECO:0000313|EMBL:AAC67523.1}; TaxID=83521 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. GI-H.;"
DNA methylase N-4/N-6 domain-containing protein
rifcsphigho2_01_scaffold_52911_18

Not on your lists

comp(11520..12290)
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN07057.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative glycosyl hydrolase id=3203314 bin=GWC1_Spirochaetes_27_15 species=unknown genus=Lacinutrix taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
glycosyl hydrolase
rifcsphigho2_01_scaffold_52911_19
unknown

Not on your lists

12438..12893
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52911_20

Not on your lists

comp(12847..13269)
-----------------
DNA (423bp)
protein (141aa)
Haloacid dehalogenase-like hydrolase, putative n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH75_ACIB4 id=5103441 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62722.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Displaying 20 items

View Taxonomy