ggKbase home page

rifcsphigho2_01_scaffold_6683

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_6683_1
unknown

Not on your lists

comp(3..182)
-----------------
DNA (180bp)
protein (60aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037794A7
rifcsphigho2_01_scaffold_6683_2
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(482..1093)
-----------------
DNA (612bp)
protein (204aa)
Metallophosphoesterase
Metallophosphoesterase Tax=CG_Pacearch_03
Metallophosphoesterase id=5799698 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_6683_3
unknown

Not on your lists

comp(1090..1257)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_4

Not on your lists

1322..1603
-----------------
DNA (282bp)
protein (94aa)
Marine sediment metagenome DNA, contig: S12H4_S02906 {ECO:0000313|EMBL:GAJ00880.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
regulatory protein MarR id=5046824 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_01_scaffold_6683_5
unknown

Not on your lists

comp(1661..1900)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_6
unknown

Not on your lists

comp(1873..2040)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_7
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

2403..3719
-----------------
DNA (1317bp)
protein (439aa)
hypothetical protein Tax=AR13
rifcsphigho2_01_scaffold_6683_8
unknown

Not on your lists

3722..4342
-----------------
DNA (621bp)
protein (207aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_9
unknown

Not on your lists

4339..4581
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_10
unknown

Not on your lists

4596..6368
-----------------
DNA (1773bp)
protein (591aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_11
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

6365..6520
-----------------
DNA (156bp)
protein (52aa)
hypothetical protein Tax=AR13
rifcsphigho2_01_scaffold_6683_12
unknown

Not on your lists

6507..7376
-----------------
DNA (870bp)
protein (290aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_13
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

comp(7444..7614)
-----------------
DNA (171bp)
protein (57aa)
hypothetical protein Tax=GWA2_OD1_31_28_partial
rifcsphigho2_01_scaffold_6683_14
unknown

Not on your lists

comp(7562..7741)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_15
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

comp(7792..8970)
-----------------
DNA (1179bp)
protein (393aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP29132.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
id=2841826 bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
rifcsphigho2_01_scaffold_6683_16
unknown

Not on your lists

comp(9224..9616)
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_17
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(9679..9990)
-----------------
DNA (312bp)
protein (104aa)
DNA-directed RNA polymerase, subunit m (EC:2.7.7.6); K03057 transcription elongation factor Tax=CG_Pacearch_03
rpoM1; RpoM1 (EC:2.7.7.6)
DNA-directed RNA polymerase subunit n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NE53_METST
rifcsphigho2_01_scaffold_6683_18
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(10030..10599)
-----------------
DNA (570bp)
protein (190aa)
id=5103328 Tax=CG_Pacearch_03
hypothetical protein
id=5103328 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_6683_19
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(10839..11252)
-----------------
DNA (414bp)
protein (138aa)
Vitamin K epoxide reductase {ECO:0000313|EMBL:KKR12179.1}; TaxID=1619013 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC2_39_22.;"
vitamin K epoxide reductase id=15190710 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
rifcsphigho2_01_scaffold_6683_20
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(11524..12171)
-----------------
DNA (648bp)
protein (216aa)
Tax=CG_Pacearch_02
rifcsphigho2_01_scaffold_6683_21
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(12225..13571)
-----------------
DNA (1347bp)
protein (449aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379ED05
major facilitator superfamily protein Tax=CG_Pacearch_02
major facilitator superfamily protein
rifcsphigho2_01_scaffold_6683_22
unknown

Not on your lists

comp(13709..14290)
-----------------
DNA (582bp)
protein (194aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_23
unknown

Not on your lists

comp(14251..14493)
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_24
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

14563..14928
-----------------
DNA (366bp)
protein (122aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376420B
hypothetical protein
id=5103196 Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_6683_25
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

14909..17194
-----------------
DNA (2286bp)
protein (762aa)
ATPase AAA (EC:3.6.1.3); K13525 transitional endoplasmic reticulum ATPase Tax=CG_Pacearch_03
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037925B2
AAA family ATPase, CDC48 subfamily
rifcsphigho2_01_scaffold_6683_26
unknown

Not on your lists

comp(17304..17711)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6683_27
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(17730..18650)
-----------------
DNA (921bp)
protein (307aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=CG_Pacearch_02
Methionine aminopeptidase n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=AMPM_ARCFU id=5103200 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Methionine aminopeptidase
rifcsphigho2_01_scaffold_6683_28
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

18754..20694
-----------------
DNA (1941bp)
protein (647aa)
Conserved repeat domain protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T991_METSL
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:ADZ09842.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Metha
rifcsphigho2_01_scaffold_6683_29
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(20735..21187)
-----------------
DNA (453bp)
protein (151aa)
Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_6683_30
R_OD1_Yanofskybacteria_49_25, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(21184..21510)
-----------------
DNA (327bp)
protein (109aa)
id=89226 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_25_curated
id=89226 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Displaying items 1-30 of 56 in total

View Taxonomy