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rifcsphigho2_01_scaffold_29407

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_29407_1
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(1..456)
-----------------
DNA (456bp)
protein (152aa)
msrA; peptide-methionine (S)-S-oxide reductase (EC:1.8.4.11)
msrA; peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=5241028 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
msrA; peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=AR10
rifcsphigho2_01_scaffold_29407_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(526..825)
-----------------
DNA (300bp)
protein (100aa)
hypothetical protein
seg id=5241027 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
seg Tax=AR10
rifcsphigho2_01_scaffold_29407_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


1002..1298
-----------------
DNA (297bp)
protein (99aa)
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e id=5241026 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e Tax=AR10
large subunit ribosomal protein L21e
rifcsphigho2_01_scaffold_29407_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

1295..1645
-----------------
DNA (351bp)
protein (117aa)
hypothetical protein; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] id=5241025 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=AR10
hypothetical protein
rifcsphigho2_01_scaffold_29407_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

1667..2254
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein
hypothetical protein; K07572 putative nucleotide binding protein Tax=AR10
hypothetical protein; K07572 putative nucleotide binding protein id=5241024 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
rifcsphigho2_01_scaffold_29407_6
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


2287..3120
-----------------
DNA (834bp)
protein (278aa)
ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase (EC:2.1.1.182)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=5241023 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=AR10
rifcsphigho2_01_scaffold_29407_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

3173..3502
-----------------
DNA (330bp)
protein (110aa)
hypothetical protein
seg id=5241022 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
seg Tax=AR10
rifcsphigho2_01_scaffold_29407_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(3503..5062)
-----------------
DNA (1560bp)
protein (520aa)
thymidine phosphorylase (EC:2.4.2.4)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5241021 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=AR10
rifcsphigho2_01_scaffold_29407_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

5086..5802
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein
coiled-coil id=5241020 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
coiled-coil Tax=AR10
rifcsphigho2_01_scaffold_29407_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

5922..6752
-----------------
DNA (831bp)
protein (277aa)
hypothetical protein
transmembrane_regions id=5241019 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
transmembrane_regions Tax=AR10
rifcsphigho2_01_scaffold_29407_11
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(6754..7965)
-----------------
DNA (1212bp)
protein (404aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5241018 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=AR10
rifcsphigho2_01_scaffold_29407_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(7965..9281)
-----------------
DNA (1317bp)
protein (439aa)
dihydroorotase (EC:3.5.2.3) rbh
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3] id=5241016 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3] Tax=AR10
rifcsphigho2_01_scaffold_29407_13
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(9274..10116)
-----------------
DNA (843bp)
protein (281aa)
dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2)
dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2); K02823 dihydroorotate dehydrogenase electron transfer subunit id=5241015 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2); K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=AR10
rifcsphigho2_01_scaffold_29407_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(10109..11002)
-----------------
DNA (894bp)
protein (298aa)
dihydroorotate dehydrogenase fumarate (EC:1.3.98.1)
dihydroorotate dehydrogenase 1B (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=5241014 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
dihydroorotate dehydrogenase 1B (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=AR10
rifcsphigho2_01_scaffold_29407_15
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(11007..11333)
-----------------
DNA (327bp)
protein (109aa)
aspartate carbamoyltransferase regulatory subunit
aspartate carbamoyltransferase regulatory chain; K00610 aspartate carbamoyltransferase regulatory subunit id=5241013 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
aspartate carbamoyltransferase regulatory chain; K00610 aspartate carbamoyltransferase regulatory subunit Tax=AR10
rifcsphigho2_01_scaffold_29407_16
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(11284..11442)
-----------------
DNA (159bp)
protein (53aa)
aspartate carbamoyltransferase regulatory subunit
aspartate carbamoyltransferase regulatory chain; K00610 aspartate carbamoyltransferase regulatory subunit id=5241013 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
aspartate carbamoyltransferase regulatory chain; K00610 aspartate carbamoyltransferase regulatory subunit Tax=AR10
rifcsphigho2_01_scaffold_29407_17
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(11439..12386)
-----------------
DNA (948bp)
protein (316aa)
putative aspartate carbamoyltransferase catalytic subunit id=5241012 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
hypothetical protein
putative aspartate carbamoyltransferase catalytic subunit Tax=AR10
rifcsphigho2_01_scaffold_29407_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(12502..13020)
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein
RNA polymerase sigma factor, region 2 id=5241011 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
RNA polymerase sigma factor, region 2 Tax=AR10
Displaying 18 items

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