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rifcsphigho2_01_scaffold_31262

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_31262_1
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

2..1312
-----------------
DNA (1311bp)
protein (437aa)
hypothetical protein
GI15642 gene product from transcript GI15642-RA id=5241348 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
hypothetical protein Tax=AR10
rifcsphigho2_01_scaffold_31262_2

Not on your lists


2019..3206
-----------------
DNA (1188bp)
protein (396aa)
large subunit ribosomal protein L3
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5241350 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_31262_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

3214..4023
-----------------
DNA (810bp)
protein (270aa)
large subunit ribosomal protein L4e
LSU ribosomal protein l4p; K02930 large subunit ribosomal protein L4e id=5241351 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
LSU ribosomal protein l4p; K02930 large subunit ribosomal protein L4e Tax=AR10
rifcsphigho2_01_scaffold_31262_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


4017..4442
-----------------
DNA (426bp)
protein (142aa)
large subunit ribosomal protein L23
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=5241352 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=AR10
rifcsphigho2_01_scaffold_31262_5

Not on your lists


4442..5164
-----------------
DNA (723bp)
protein (241aa)
large subunit ribosomal protein L2
LSU ribosomal protein l2p; K02886 large subunit ribosomal protein L2 id=5241353 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_31262_6

Not on your lists


5181..5585
-----------------
DNA (405bp)
protein (135aa)
small subunit ribosomal protein S19
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5241354 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsphigho2_01_scaffold_31262_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


5590..6060
-----------------
DNA (471bp)
protein (157aa)
50S ribosomal protein L22P, large subunit ribosomal protein L22 rbh
rpl22p; 50S ribosomal protein L22P; K02890 large subunit ribosomal protein L22 id=5241355 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
rpl22p; 50S ribosomal protein L22P; K02890 large subunit ribosomal protein L22 Tax=AR10
rifcsphigho2_01_scaffold_31262_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


6061..7020
-----------------
DNA (960bp)
protein (320aa)
small subunit ribosomal protein S3
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=5241356 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=AR10
rifcsphigho2_01_scaffold_31262_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

7026..7172
-----------------
DNA (147bp)
protein (49aa)
hypothetical protein
Ribosomal protein L29 Tax=AR10
Ribosomal protein L29 id=5241357 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_31262_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

7237..7542
-----------------
DNA (306bp)
protein (102aa)
translation initiation factor 1
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 id=5241358 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 Tax=AR10
rifcsphigho2_01_scaffold_31262_11
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

7535..7837
-----------------
DNA (303bp)
protein (101aa)
ribonuclease P protein subunit POP4 (EC:3.1.26.5)
ribonuclease P, Rpp29; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] id=5241359 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ribonuclease P, Rpp29; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=AR10
rifcsphigho2_01_scaffold_31262_12

Not on your lists


7830..8138
-----------------
DNA (309bp)
protein (103aa)
small subunit ribosomal protein S17
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=5241360 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_31262_13
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


8125..8526
-----------------
DNA (402bp)
protein (134aa)
50S ribosomal protein L14, large subunit ribosomal protein L14
rpl14p; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5241361 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rpl14p; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=AR10
rifcsphigho2_01_scaffold_31262_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


8536..8994
-----------------
DNA (459bp)
protein (153aa)
large subunit ribosomal protein L24
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5241362 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=AR10
rifcsphigho2_01_scaffold_31262_15
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


9013..9750
-----------------
DNA (738bp)
protein (246aa)
small subunit ribosomal protein S4e
30S ribosomal protein S4; K02987 small subunit ribosomal protein S4e id=5241363 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
30S ribosomal protein S4; K02987 small subunit ribosomal protein S4e Tax=AR10
rifcsphigho2_01_scaffold_31262_16
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


9747..10253
-----------------
DNA (507bp)
protein (169aa)
large subunit ribosomal protein L5
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5241364 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=AR10
rifcsphigho2_01_scaffold_31262_17
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


10250..10402
-----------------
DNA (153bp)
protein (51aa)
small subunit ribosomal protein S14
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 id=5241365 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=AR10
rifcsphigho2_01_scaffold_31262_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


10412..10804
-----------------
DNA (393bp)
protein (131aa)
30S ribosomal protein S8, small subunit ribosomal protein S8
rps8p; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=5241366 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rps8p; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=AR10
rifcsphigho2_01_scaffold_31262_19
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


10819..11388
-----------------
DNA (570bp)
protein (190aa)
large subunit ribosomal protein L6
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=5241367 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=AR10
rifcsphigho2_01_scaffold_31262_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

11369..12055
-----------------
DNA (687bp)
protein (229aa)
large subunit ribosomal protein L32e
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e id=5241368 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e Tax=AR10
rifcsphigho2_01_scaffold_31262_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

12052..12492
-----------------
DNA (441bp)
protein (147aa)
50S ribosomal protein L19e, large subunit ribosomal protein L19e
rpl19e; 50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e id=5241369 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rpl19e; 50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e Tax=AR10
rifcsphigho2_01_scaffold_31262_22

Not on your lists


12489..13061
-----------------
DNA (573bp)
protein (191aa)
large subunit ribosomal protein L18
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=5241370 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_31262_23
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


13003..13680
-----------------
DNA (678bp)
protein (226aa)
30S ribosomal protein S5, small subunit ribosomal protein S5
rps5p; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=5241371 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
rps5p; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=AR10
rifcsphigho2_01_scaffold_31262_24
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


13685..14146
-----------------
DNA (462bp)
protein (154aa)
50S ribosomal protein L30P, large subunit ribosomal protein L30
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 id=5241372 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=AR10
rifcsphigho2_01_scaffold_31262_25

Not on your lists


14159..14641
-----------------
DNA (483bp)
protein (161aa)
50S ribosomal protein L15, large subunit ribosomal protein L15
rpl15p; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=5241373 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsphigho2_01_scaffold_31262_26
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

14638..15936
-----------------
DNA (1299bp)
protein (433aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5241374 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=AR10
preprotein translocase subunit SecY
Displaying 26 items

View Taxonomy