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rifcsphigho2_01_scaffold_28997

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_28997_1
AR10, Diapherotrites, DPANN, Archaea

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190..1536
-----------------
DNA (1347bp)
protein (449aa)
signal recognition particle subunit SRP54 rbh
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5241625 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=AR10
rifcsphigho2_01_scaffold_28997_2
AR10, Diapherotrites, DPANN, Archaea

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1545..2357
-----------------
DNA (813bp)
protein (271aa)
hypothetical protein
transmembrane_regions id=5241624 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
transmembrane_regions Tax=AR10
rifcsphigho2_01_scaffold_28997_3
AR10, Diapherotrites, DPANN, Archaea

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2398..3456
-----------------
DNA (1059bp)
protein (353aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] id=5241623 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] T
rifcsphigho2_01_scaffold_28997_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(3453..4478)
-----------------
DNA (1026bp)
protein (342aa)
RNA 3'-terminal phosphate cyclase (EC:6.5.1.4) rbh
RNA 3'-terminal-phosphate cyclase; K01974 RNA 3'-terminal phosphate cyclase [EC:6.5.1.4] id=5241622 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
RNA 3'-terminal-phosphate cyclase; K01974 RNA 3'-terminal phosphate cyclase [EC:6.5.1.4] Tax=AR10
rifcsphigho2_01_scaffold_28997_5
AR10, Diapherotrites, DPANN, Archaea

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4527..5429
-----------------
DNA (903bp)
protein (301aa)
UDP-glucose 4-epimerase (EC:5.1.3.2) rbh
nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=5241621 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=AR10
rifcsphigho2_01_scaffold_28997_6
AR10, Diapherotrites, DPANN, Archaea

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comp(5422..5928)
-----------------
DNA (507bp)
protein (169aa)
ArsR family transcriptional regulator rbh
ArsR family transcriptional regulator id=5241620 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
ArsR family transcriptional regulator Tax=AR10
rifcsphigho2_01_scaffold_28997_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

6031..7515
-----------------
DNA (1485bp)
protein (495aa)
hypothetical protein
transmembrane_regions id=5241619 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
transmembrane_regions Tax=AR10
Displaying 7 items

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