ggKbase home page

rifcsphigho2_01_scaffold_23173

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_23173_1
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

1..618
-----------------
DNA (618bp)
protein (206aa)
hypothetical protein
hypothetical protein id=5241387 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
hypothetical protein Tax=AR10
rifcsphigho2_01_scaffold_23173_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

655..2304
-----------------
DNA (1650bp)
protein (550aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=5241388 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=AR10
rifcsphigho2_01_scaffold_23173_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(2319..2651)
-----------------
DNA (333bp)
protein (111aa)
hypothetical protein
seg id=5241389 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
seg Tax=AR10
rifcsphigho2_01_scaffold_23173_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


3176..3541
-----------------
DNA (366bp)
protein (122aa)
add45; ribosomal protein L7Ae/L30e/S12e/Glarge subunit ribosomal protein L7Ae
ribosomal protein L7Ae/L30e/S12e/Gadd45; K02936 large subunit ribosomal protein L7Ae id=5241390 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ribosomal protein L7Ae/L30e/S12e/Gadd45; K02936 large subunit ribosomal protein L7Ae Tax=AR10
rifcsphigho2_01_scaffold_23173_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


3558..3707
-----------------
DNA (150bp)
protein (50aa)
30S ribosomal protein S28, small subunit ribosomal protein S28e
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e id=5241391 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e Tax=AR10
rifcsphigho2_01_scaffold_23173_6
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

3845..4297
-----------------
DNA (453bp)
protein (151aa)
nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5241393 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
nucleoside-diphosphate kinase (EC:2.7.4.6)
nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=AR10
rifcsphigho2_01_scaffold_23173_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

4301..4732
-----------------
DNA (432bp)
protein (144aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase, dUTP pyrophosphatase (EC:3.6.1.23)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=5241394 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=AR10
rifcsphigho2_01_scaffold_23173_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

4769..6523
-----------------
DNA (1755bp)
protein (585aa)
translation initiation factor IF-2, translation initiation factor 5B
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B id=5241395 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=AR10
rifcsphigho2_01_scaffold_23173_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


6520..7005
-----------------
DNA (486bp)
protein (162aa)
30S ribosomal protein S6e, small subunit ribosomal protein S6e
rps6e; 30S ribosomal protein S6e; K02991 small subunit ribosomal protein S6e id=5241396 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
rps6e; 30S ribosomal protein S6e; K02991 small subunit ribosomal protein S6e Tax=AR10
rifcsphigho2_01_scaffold_23173_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


7013..8212
-----------------
DNA (1200bp)
protein (400aa)
translation initiation factor 2 subunit 3
translation initiation factor 2 subunit gamma (aeif-2g); K03242 translation initiation factor 2 subunit 3 id=5241397 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
translation initiation factor 2 subunit gamma (aeif-2g); K03242 translation initiation factor 2 subunit 3 Tax=AR10
rifcsphigho2_01_scaffold_23173_11
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

8196..8579
-----------------
DNA (384bp)
protein (128aa)
PilT protein
PilT domain protein id=5241398 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PilT domain protein Tax=AR10
rifcsphigho2_01_scaffold_23173_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


8591..9196
-----------------
DNA (606bp)
protein (202aa)
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] id=5241399 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
DNA-directed RNA polymerase (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] Tax=AR10
rifcsphigho2_01_scaffold_23173_13

Not on your lists

9193..9387
-----------------
DNA (195bp)
protein (65aa)
transcription elongation factor Spt4/RpoE2, zinc finger protein, DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
Spt4; transcription elongation factor Spt4/RpoE2, zinc finger protein; K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] id=5241400 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_23173_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

9402..9776
-----------------
DNA (375bp)
protein (125aa)
rps24e; 30S ribosomal protein S24E; K02974 small subunit ribosomal protein S24e id=5241401 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rps24e; 30S ribosomal protein S24E; K02974 small subunit ribosomal protein S24e Tax=AR10
30S ribosomal protein S24E, small subunit ribosomal protein S24e
rifcsphigho2_01_scaffold_23173_15
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

9857..10057
-----------------
DNA (201bp)
protein (67aa)
small subunit ribosomal protein S27Ae
30S ribosomal protein S27; K02977 small subunit ribosomal protein S27Ae id=5241402 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S27; K02977 small subunit ribosomal protein S27Ae Tax=AR10
rifcsphigho2_01_scaffold_23173_16
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

10074..10589
-----------------
DNA (516bp)
protein (172aa)
CAAX protease self-immunity rbh
CAAX protease self-immunity id=5241403 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
CAAX protease self-immunity Tax=AR10
rifcsphigho2_01_scaffold_23173_17
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

10586..11200
-----------------
DNA (615bp)
protein (205aa)
tRNA threonylcarbamoyladenosine biosynthesis protein
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein id=5241404 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=AR10
rifcsphigho2_01_scaffold_23173_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


11197..12162
-----------------
DNA (966bp)
protein (322aa)
DNA-binding/iron metalloprotein/AP endonuclease, tRNA threonylcarbamoyladenosine biosynthesis protein
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein id=5241405 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=AR10
Displaying 18 items

View Taxonomy