ggKbase home page

rifcsphigho2_01_scaffold_25108

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_01_scaffold_25108_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


1..1314
-----------------
DNA (1314bp)
protein (438aa)
ASCG--Signal--recognition--particle--54--kDa--protein
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003799DAC
SRP54-type protein, GTPase protein
rifcsphigho2_01_scaffold_25108_2
unknown

Not on your lists

comp(1948..2613)
-----------------
DNA (666bp)
protein (222aa)

This feature has no annotations

rifcsphigho2_01_scaffold_25108_3

Not on your lists

2693..3712
-----------------
DNA (1020bp)
protein (340aa)
glycosyl transferase family protein id=5048704 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyl transferase family protein
rifcsphigho2_01_scaffold_25108_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3709..5070
-----------------
DNA (1362bp)
protein (454aa)
PHP domain protein id=5800577 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PHP protein
rifcsphigho2_01_scaffold_25108_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5134..5913
-----------------
DNA (780bp)
protein (260aa)
rifcsphigho2_01_scaffold_25108_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5906..7693
-----------------
DNA (1788bp)
protein (596aa)
Peptidase M23 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V668_9BRAD
peptidase M23/M37
rifcsphigho2_01_scaffold_25108_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7706..8620)
-----------------
DNA (915bp)
protein (305aa)
Uncharacterized protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TJV7_CALNY
hypothetical protein
rifcsphigho2_01_scaffold_25108_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

8900..9655
-----------------
DNA (756bp)
protein (252aa)
rifcsphigho2_01_scaffold_25108_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

10094..12172
-----------------
DNA (2079bp)
protein (693aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SMC protein
rifcsphigho2_01_scaffold_25108_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

12379..12528
-----------------
DNA (150bp)
protein (50aa)
rifcsphigho2_01_scaffold_25108_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

12618..13334
-----------------
DNA (717bp)
protein (239aa)
rifcsphigho2_01_scaffold_25108_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


13479..13817
-----------------
DNA (339bp)
protein (113aa)
ASCG--Ribosomal--protein--L7Ae--L8e
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5045790 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl7ae; 50S ribosomal protein L7Ae
rifcsphigho2_01_scaffold_25108_13
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


13819..14142
-----------------
DNA (324bp)
protein (108aa)
ASCG--Ribosomal--protein--S28e
rps28e; 30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e id=5043962 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S28e
rifcsphigho2_01_scaffold_25108_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


14143..14337
-----------------
DNA (195bp)
protein (65aa)
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e id=5045789 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L24
rifcsphigho2_01_scaffold_25108_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14289..14873
-----------------
DNA (585bp)
protein (195aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5045788 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
nucleoside diphosphate kinase
Displaying 15 items

View Taxonomy