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rifcsphigho2_01_scaffold_3428

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_3428_1

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comp(85..810)
-----------------
DNA (726bp)
protein (242aa)
hypothetical protein id=18248438 bin=AR5_curated_draft species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48441.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
rifcsphigho2_01_scaffold_3428_2
CG_Micra_06, Micraarchaeota, Archaea

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1034..1987
-----------------
DNA (954bp)
protein (318aa)
nhaA3; DSBA-like thioredoxin domain-containing protein Tax=CG_Micra_06
DSBA oxidoreductase id=5044103 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
protein-disulfide isomerase-like protein
rifcsphigho2_01_scaffold_3428_3
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2066..2506)
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein id=4010368 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Protein-disulfide isomerase {ECO:0000313|EMBL:EGP93772.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitroso
exported protein of unknown function
rifcsphigho2_01_scaffold_3428_4
Hippea maritima, Hippea, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2967..3401)
-----------------
DNA (435bp)
protein (145aa)
CoA-binding domain protein n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LXL3_HIPMA
CoA-binding domain-containing protein
CoA-binding domain protein {ECO:0000313|EMBL:AEA33199.1}; TaxID=760142 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Hippea.;" source="Hippea maritima (str
rifcsphigho2_01_scaffold_3428_5
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

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3505..4743
-----------------
DNA (1239bp)
protein (413aa)
hypothetical protein
transmembrane_regions 21..43 Tax=CG_Levy_01
id=4010370 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_3428_6
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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4967..5695
-----------------
DNA (729bp)
protein (243aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R371_METFO
Uncharacterized protein {ECO:0000313|EMBL:EKF86998.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacte
hypothetical protein
rifcsphigho2_01_scaffold_3428_7

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comp(5736..6032)
-----------------
DNA (297bp)
protein (99aa)
50S ribosomal protein L12 n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TCF8_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rpl12p; 50S ribosomal protein L12p
rifcsphigho2_01_scaffold_3428_8
CG_Micra_02, Micraarchaeota, Archaea

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comp(6161..7030)
-----------------
DNA (870bp)
protein (290aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI0003680E91
acidic ribosomal protein P0; K02864 large subunit ribosomal protein L10 Tax=CG_Micra_02
rplP0; acidic ribosomal protein P0
rifcsphigho2_01_scaffold_3428_9
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists


comp(7143..7781)
-----------------
DNA (639bp)
protein (213aa)
Ribosomal protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHU4_9EURY
rpl1p; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=CG_Micra_06
50S ribosomal protein L1
rifcsphigho2_01_scaffold_3428_10
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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8046..12578
-----------------
DNA (4533bp)
protein (1511aa)
peptidase M6, immune inhibitor A; K09607 immune inhibitor A [EC:3.4.24.-] Tax=RBG_13_Caldithrix_44_9_curated
Peptidase M6, immune inhibitor A n=1 Tax=Vibrio sp. EJY3 RepID=H2IN95_9VIBR rbh
peptidase M6, immune inhibitor A
rifcsphigho2_01_scaffold_3428_11
CG_CPR16-01, CG_CPR16, Bacteria

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12789..15191
-----------------
DNA (2403bp)
protein (801aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=CG_CPR16-01
dly:Dehly_0790 phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=87079 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
phosphoenolpyruvate synthase
rifcsphigho2_01_scaffold_3428_12
unknown

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comp(15208..15624)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3428_13
unknown

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comp(15634..15888)
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3428_14
unknown

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comp(16126..16926)
-----------------
DNA (801bp)
protein (267aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3428_15
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

17025..18143
-----------------
DNA (1119bp)
protein (373aa)
cell division control protein; K10725 archaeal cell division control protein 6 Tax=CG_Micra_02
archaeal cell division control protein 6
ORC complex protein Cdc6/Orc1; K10725 archaeal cell division control protein 6 id=5241737 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_3428_16
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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18196..18585
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=2 Tax=Caldanaerobacter subterraneus RepID=U5CKB3_THEYO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIS53262.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaero
rifcsphigho2_01_scaffold_3428_17
CG_Micra_05, Micraarchaeota, Archaea

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18646..19386
-----------------
DNA (741bp)
protein (247aa)
hypothetical protein
transmembrane_regions Tax=CG_Micra_05
transmembrane_regions id=5240712 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_3428_18
AR17, Woesearchaeaota, DPANN, Archaea

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19479..21200
-----------------
DNA (1722bp)
protein (574aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=AR17
methionyl-tRNA synthetase (EC:6.1.1.10)
Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3S8S1_TRIAD
rifcsphigho2_01_scaffold_3428_19
unknown

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21211..21693
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3428_20
CG_Micra_02, Micraarchaeota, Archaea

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21796..23112
-----------------
DNA (1317bp)
protein (439aa)
Tax=CG_Micra_02
rifcsphigho2_01_scaffold_3428_21
CG_Micra_02, Micraarchaeota, Archaea

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23181..24392
-----------------
DNA (1212bp)
protein (404aa)
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=CG_Micra_02
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D8B8_METSW
rifcsphigho2_01_scaffold_3428_22
unknown

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24425..24886
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3428_23
CG_Micra_04, Micraarchaeota, Archaea

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comp(24957..26435)
-----------------
DNA (1479bp)
protein (493aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=CG_Micra_04
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMC4_CLOSH
rifcsphigho2_01_scaffold_3428_24
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(26590..26901)
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000377957E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM05784.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina ac
rifcsphigho2_01_scaffold_3428_25
CG_Micra_06, Micraarchaeota, Archaea

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comp(26976..28196)
-----------------
DNA (1221bp)
protein (407aa)
Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=A9A688_METM6
hypothetical protein Tax=CG_Micra_06
hypothetical protein
rifcsphigho2_01_scaffold_3428_26
CG_Micra_06, Micraarchaeota, Archaea

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comp(28208..29413)
-----------------
DNA (1206bp)
protein (402aa)
Uncharacterized protein n=3 Tax=Methanococcus maripaludis RepID=A4FZ02_METM5 id=5103793 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Micra_06
hypothetical protein
rifcsphigho2_01_scaffold_3428_27
CG_Micra_06, Micraarchaeota, Archaea

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comp(29525..31078)
-----------------
DNA (1554bp)
protein (518aa)
Tax=CG_Micra_06
rifcsphigho2_01_scaffold_3428_28
CG_Micra_06, Micraarchaeota, Archaea

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comp(31200..31940)
-----------------
DNA (741bp)
protein (247aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI0003726E33
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=CG_Micra_06
ABC transporter-like protein
rifcsphigho2_01_scaffold_3428_29
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

32063..33115
-----------------
DNA (1053bp)
protein (351aa)
Fibronectin-binding A domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN09_ARCVS
RNA-binding protein-like protein Tax=CG_Micra_06
RNA-binding protein homologous to eukaryotic snRNP
rifcsphigho2_01_scaffold_3428_30
CG_Falkow_01, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

33343..34296
-----------------
DNA (954bp)
protein (318aa)
PpsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=CG_Falkow_01
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=136454 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
phosphoenolpyruvate synthase
Displaying items 1-30 of 52 in total

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