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rifcsphigho2_01_scaffold_5139

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_5139_1
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

179..358
-----------------
DNA (180bp)
protein (60aa)
Tax=CG_Micra_06
rifcsphigho2_01_scaffold_5139_2
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists


367..801
-----------------
DNA (435bp)
protein (145aa)
Transcription elongation factor Spt5 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VT24_9EURY
50S ribosomal protein L24a; K02601 transcriptional antiterminator NusG Tax=CG_Micra_02
50S ribosomal protein L24a
rifcsphigho2_01_scaffold_5139_3
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


957..1460
-----------------
DNA (504bp)
protein (168aa)
50S ribosomal protein L11 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYZ3_9EURY
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Micra_03
50S ribosomal protein L11
rifcsphigho2_01_scaffold_5139_4
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

1646..1924
-----------------
DNA (279bp)
protein (93aa)
DNA/RNA-binding protein Alba n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=ALBA_METST
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein Tax=CG_Micra_02
DNA/RNA-binding protein albA
rifcsphigho2_01_scaffold_5139_5
unknown

Not on your lists

comp(2078..2896)
-----------------
DNA (819bp)
protein (273aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5139_6
unknown

Not on your lists

comp(2847..3194)
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5139_7
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists


comp(3276..5027)
-----------------
DNA (1752bp)
protein (584aa)
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=CG_Micra_06
Uncharacterized protein n=2 Tax=Bacteria RepID=V5RUG2_9BACT
hypothetical protein
rifcsphigho2_01_scaffold_5139_8
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(5191..6171)
-----------------
DNA (981bp)
protein (327aa)
glycosyl transferase family protein; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] Tax=CG_Micra_01
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC:2.7.8.15)
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SH21_9BACT
rifcsphigho2_01_scaffold_5139_9
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(6168..8963)
-----------------
DNA (2796bp)
protein (932aa)
uncharacterized membrane protein required for N-linked glycosylation; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] Tax=CG_Micra_04
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5Y4_9ARCH
hypothetical protein
rifcsphigho2_01_scaffold_5139_10

Not on your lists

9076..9984
-----------------
DNA (909bp)
protein (303aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00035E5253
Uncharacterized protein {ECO:0000313|EMBL:KKM15809.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative glycosyltransferase
rifcsphigho2_01_scaffold_5139_11
Bacillus safensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10090..11076)
-----------------
DNA (987bp)
protein (329aa)
YfnG n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGA1_CLOBU
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KDE26573.1}; TaxID=1178541 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus safensis FO-36b.;"
sugar dehydratase
rifcsphigho2_01_scaffold_5139_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

11187..12332
-----------------
DNA (1146bp)
protein (382aa)
Glycosyl transferase, group 1 n=1 Tax=Acidilobus saccharovorans (strain DSM 16705 / VKM B-2471 / 345-15) RepID=D9Q1A1_ACIS3
glycosyl transferase group 1
group 1 glycosyl transferase Tax=AR18
rifcsphigho2_01_scaffold_5139_13
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

12337..13620
-----------------
DNA (1284bp)
protein (428aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Glycosyl transferase family 9 n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P703_METFA
glycosyl transferase family protein
rifcsphigho2_01_scaffold_5139_14

Not on your lists

13635..14576
-----------------
DNA (942bp)
protein (314aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C6D4_THENR
Uncharacterized protein {ECO:0000313|EMBL:KKK65355.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_01_scaffold_5139_15
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

14573..15640
-----------------
DNA (1068bp)
protein (356aa)
Glycosyl transferase, group 1 n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CU40_METMJ
glycosyltransferase Tax=CG_Woesearch_01
glycosyl transferase, group 1
rifcsphigho2_01_scaffold_5139_16
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

15647..16600
-----------------
DNA (954bp)
protein (318aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NA39_9ARCH
putative glycosyltransferase Tax=RBG_13_Nitrospirae_39_12_curated
family 2 glycosyl transferase
rifcsphigho2_01_scaffold_5139_17
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16800..17348)
-----------------
DNA (549bp)
protein (183aa)
type 11 methyltransferase Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
Methyltransferase domain protein id=5016394 bin=GWA2_OP3_52_12 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
type 11 methyltransferase
rifcsphigho2_01_scaffold_5139_18
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17355..18308)
-----------------
DNA (954bp)
protein (318aa)
ADP-heptose synthase Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
RfaE bifunctional protein, domain I id=2225543 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
rfaE bifunctional protein
rifcsphigho2_01_scaffold_5139_19
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(18334..18894)
-----------------
DNA (561bp)
protein (187aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=CG_Arma_01
RfaE bifunctional protein, domain II n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWE6_9BACT
rfaE bifunctional protein, domain II
rifcsphigho2_01_scaffold_5139_20
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18898..19440)
-----------------
DNA (543bp)
protein (181aa)
histidinol-phosphate phosphatase family protein (EC:3.1.3.15); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
histidinol-phosphate phosphatase family protein (EC:3.1.3.15)
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A951_THEID
rifcsphigho2_01_scaffold_5139_21
R_RIF_OD1_07_41_9, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(19455..20024)
-----------------
DNA (570bp)
protein (190aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_41_9_curated
Phosphoheptose isomerase n=1 Tax=Geobacter sp. (strain M21) RepID=GMHA_GEOSM
phosphoheptose isomerase
rifcsphigho2_01_scaffold_5139_22
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20152..21297)
-----------------
DNA (1146bp)
protein (382aa)
Glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase {ECO:0000313|EMBL:AKB59188.1}; EC=2.4.1.- {ECO:0000313|EMBL:AKB59188.1};; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Met
Glycosyltransferase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U0R7_9EURY
rifcsphigho2_01_scaffold_5139_23
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(21294..22544)
-----------------
DNA (1251bp)
protein (417aa)
C-methyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
C-methyltransferase id=2633934 bin=GWC2_Proteo_65_14_Ab886 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
C-methyltransferase
rifcsphigho2_01_scaffold_5139_24
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

22635..23165
-----------------
DNA (531bp)
protein (177aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29640_ARCFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAB90627.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (s
rifcsphigho2_01_scaffold_5139_25
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23466..24323
-----------------
DNA (858bp)
protein (286aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1304284
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARI9_9CLOT
rifcsphigho2_01_scaffold_5139_26
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(24382..25572)
-----------------
DNA (1191bp)
protein (397aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI00037936EF
DegT/DnrJ/EryC1/StrS aminotransferase; K12452 CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase Tax=CG_CPR10_03
rifcsphigho2_01_scaffold_5139_27

Not on your lists

comp(25565..26542)
-----------------
DNA (978bp)
protein (326aa)
gmd; GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] id=5098275 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=77133 species="Bacteri
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
rifcsphigho2_01_scaffold_5139_28
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(26552..27424)
-----------------
DNA (873bp)
protein (291aa)
GalE-1 UDP-glucose 4-epimerase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V1X1_PYRAB
galE-1; UDP-glucose 4-epimerase
GalE-1 UDP-glucose 4-epimerase {ECO:0000313|EMBL:CAB49227.1}; UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCE69681.1}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermoco
rifcsphigho2_01_scaffold_5139_29
R_RIF_OD1_07_48_27b, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

27870..28478
-----------------
DNA (609bp)
protein (203aa)
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DXB6_METI4
menaquinone biosynthesis methyltransferase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_48_27b_curated
ubiG; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
rifcsphigho2_01_scaffold_5139_30
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(28577..30157)
-----------------
DNA (1581bp)
protein (527aa)
polysaccharide biosynthesis related protein id=5045302 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
polysaccharide biosynthesis related protein Tax=AR18
Polysaccharide biosynthesis protein
Displaying items 1-30 of 49 in total

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